RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ZKSCAN3Q9BRR0 538 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 ARPP21Q9UBL0 812 aaPredicted RBP11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 ANKRD31Q8N7Z5 1873 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 NRXN2Q9P2S2 1712 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 SMTNL1A8MU46 457 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 GUCY1B3Q02153 619 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 POTEAQ6S8J7 498 aa11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 TNS1Q9HBL0 1735 aaKnown RBP11.51□□□□□ -0.57
PRPF38B-203ENST00000370025 RANBP6O60518 1105 aaKnown RBP11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 RXRAP19793 462 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 USP5P45974 858 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 ATL3Q6DD88 541 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 TTC6Q86TZ1 520 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 SLF2Q8IX21 1173 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 ZNF396Q96N95 335 aaPredicted RBP11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 RGS17Q9UGC6 210 aaPredicted RBP11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 CYP2D7A0A087X1C5 515 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 RGPD3A6NKT7 1758 aaPredicted RBP11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 IARSP41252 1262 aaKnown RBP11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 SBK1Q52WX2 424 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 RGPD4Q7Z3J3 1758 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 AMOTL1Q8IY63 956 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 BICD2Q8TD16 824 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 ZC3H12CQ9C0D7 883 aaKnown RBP11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 STK32BQ9NY57 414 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 A0A087WWV3 80 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 CCDC196A0A1B0GTZ2 297 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 RGS22Q8NE09 1264 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 RSPH14Q9UHP6 348 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 DUOX1Q9NRD9 1551 aa11.5□□□□□ -0.57
PRPF38B-203ENST00000370025 FGRP09769 529 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 GYS2P54840 703 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 PPP4CP60510 307 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 PDE4BQ07343 736 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 FBXO18Q8NFZ0 1043 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 ZNF622Q969S3 477 aaKnown RBP eCLIP11.49□□□□□ -0.573e-7■■■□□ 19.2
PRPF38B-203ENST00000370025 MYL10Q9BUA6 226 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 COA1Q9GZY4 146 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 MCM9Q9NXL9 1143 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 KIAA1551Q9HCM1 1747 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 CCDC192P0DO97 292 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 CDC27P30260 824 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 RCAN1P53805 252 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 DIXDC1Q155Q3 683 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 SLC15A2Q16348 729 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 MFSD14BQ5SR56 506 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 LRRC37AA6NMS7 1700 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 MROH7-TTC4A0A0A0MT08 1334 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 TNKSO95271 1327 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 RIMBP2O15034 1052 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 SSRP1Q08945 709 aaKnown RBP11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 EZH2Q15910 746 aaKnown RBP11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 RTN1Q16799 776 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 DPP8Q6V1X1 898 aaPredicted RBP11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 CACTINQ8WUQ7 758 aaKnown RBP11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 ZSCAN10Q96SZ4 725 aaPredicted RBP11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 ALG1Q9BT22 464 aa11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 MORC2Q9Y6X9 1032 aaPredicted RBP11.49□□□□□ -0.57
PRPF38B-203ENST00000370025 MYH2Q9UKX2 1941 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 G3V3G9 751 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 ORC4O43929 436 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 EN1Q05925 392 aaPredicted RBP11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 ANO6Q4KMQ2 910 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 DCAF8Q5TAQ9 597 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 CLIP2Q9UDT6 1046 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 H0YIN7 160 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 TRIM66O15016 1216 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 PRDM1O75626 825 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 PLCG2P16885 1265 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 RAD51AP2Q09MP3 1159 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 TRIM29Q14134 588 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 PPP2R5BQ15173 497 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 GRIK5Q16478 980 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 SKIDA1Q1XH10 827 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 ERCC6LQ2NKX8 1250 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 C2CD5Q86YS7 1000 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 ZNF654Q8IZM8 581 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 SH3RF3Q8TEJ3 882 aaPredicted RBP11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 WASF1Q92558 559 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 FAM205AQ6ZU69 1335 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 ZRSR1Q15695 479 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 IFIT1BQ5T764 474 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 TRIM22Q8IYM9 498 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 NUP133Q8WUM0 1156 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 CAMKK2Q96RR4 588 aa11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 ZCCHC17Q9NP64 241 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-203ENST00000370025 SMIM22K7EJ46 135 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 IFNAR1P17181 557 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 NT5C2P49902 561 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 GTF2IP78347 998 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 SEC23AQ15436 765 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 NTRK3Q16288 839 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 OTUD7BQ6GQQ9 843 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 ZNF397Q8NF99 534 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 PHKBQ93100 1093 aa11.47□□□□□ -0.57
PRPF38B-203ENST00000370025 EYA3Q99504 573 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms