RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 ZNF512BQ96KM6 892 aaPredicted RBP16.53■□□□□ 0.24
PMF1-202ENST00000368277 EVX2Q03828 476 aa16.52■□□□□ 0.24
PMF1-202ENST00000368277 TRIM32Q13049 653 aa16.52■□□□□ 0.24
PMF1-202ENST00000368277 SH3D19Q5HYK7 790 aa16.52■□□□□ 0.24
PMF1-202ENST00000368277 U2AF1L4Q8WU68 220 aaKnown RBP16.52■□□□□ 0.24
PMF1-202ENST00000368277 DPF3Q92784 378 aa16.52■□□□□ 0.24
PMF1-202ENST00000368277 TRIM34Q9BYJ4 488 aa16.52■□□□□ 0.24
PMF1-202ENST00000368277 DHX36Q9H2U1 1008 aaKnown RBP16.52■□□□□ 0.24
PMF1-202ENST00000368277 AS3MTQ9HBK9 375 aa16.52■□□□□ 0.24
PMF1-202ENST00000368277 ZBTB21Q9ULJ3 1066 aa16.52■□□□□ 0.24
PMF1-202ENST00000368277 USP5P45974 858 aa16.51■□□□□ 0.23
PMF1-202ENST00000368277 ZYXQ15942 572 aaKnown RBP16.51■□□□□ 0.23
PMF1-202ENST00000368277 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
PMF1-202ENST00000368277 COA7Q96BR5 231 aa16.51■□□□□ 0.23
PMF1-202ENST00000368277 DEFB118Q96PH6 123 aa16.51■□□□□ 0.23
PMF1-202ENST00000368277 FARP2O94887 1054 aaPredicted RBP16.5■□□□□ 0.23
PMF1-202ENST00000368277 ASNSP08243 561 aa16.5■□□□□ 0.23
PMF1-202ENST00000368277 BACE1P56817 501 aa16.5■□□□□ 0.23
PMF1-202ENST00000368277 IRX3P78415 501 aaPredicted RBP16.5■□□□□ 0.23
PMF1-202ENST00000368277 IRF5Q13568 498 aa16.5■□□□□ 0.23
PMF1-202ENST00000368277 CHRDL2Q6WN34 429 aa16.5■□□□□ 0.23
PMF1-202ENST00000368277 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
PMF1-202ENST00000368277 WDR18Q9BV38 432 aa16.5■□□□□ 0.23
PMF1-202ENST00000368277 TXNRD2Q9NNW7 524 aa16.5■□□□□ 0.23
PMF1-202ENST00000368277 TMOD4Q9NZQ9 345 aa16.5■□□□□ 0.23
PMF1-202ENST00000368277 PARP14Q460N5 1801 aa16.49■□□□□ 0.23
PMF1-202ENST00000368277 SGPL1O95470 568 aa16.49■□□□□ 0.23
PMF1-202ENST00000368277 GH2P01242 217 aa16.49■□□□□ 0.23
PMF1-202ENST00000368277 HLA-DOAP06340 250 aa16.49■□□□□ 0.23
PMF1-202ENST00000368277 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
PMF1-202ENST00000368277 PABPC4Q13310 644 aaKnown RBP eCLIP16.49■□□□□ 0.231e-8■■■□□ 15
PMF1-202ENST00000368277 METTL16Q86W50 562 aaKnown RBP16.49■□□□□ 0.23
PMF1-202ENST00000368277 FOXP4Q8IVH2 680 aaPredicted RBP16.49■□□□□ 0.23
PMF1-202ENST00000368277 NKX2-3Q8TAU0 364 aa16.49■□□□□ 0.23
PMF1-202ENST00000368277 DIS3LQ8TF46 1054 aaKnown RBP16.49■□□□□ 0.23
PMF1-202ENST00000368277 EDC3Q96F86 508 aaKnown RBP16.49■□□□□ 0.23
PMF1-202ENST00000368277 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
PMF1-202ENST00000368277 COG6Q9Y2V7 657 aa16.49■□□□□ 0.23
PMF1-202ENST00000368277 RLFQ13129 1914 aa16.49■□□□□ 0.23
PMF1-202ENST00000368277 COL11A1P12107 1806 aaPredicted RBP16.48■□□□□ 0.23
PMF1-202ENST00000368277 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
PMF1-202ENST00000368277 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
PMF1-202ENST00000368277 POTEEQ6S8J3 1075 aa16.48■□□□□ 0.23
PMF1-202ENST00000368277 SIRT2Q8IXJ6 389 aa16.48■□□□□ 0.23
PMF1-202ENST00000368277 RHPN1Q8TCX5 695 aa16.48■□□□□ 0.23
PMF1-202ENST00000368277 PXYLP1Q8TE99 480 aa16.48■□□□□ 0.23
PMF1-202ENST00000368277 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
PMF1-202ENST00000368277 EMILIN3Q9NT22 766 aa16.48■□□□□ 0.23
PMF1-202ENST00000368277 SZT2Q5T011 3432 aa16.47■□□□□ 0.23
PMF1-202ENST00000368277 USP17L10C9JJH3 530 aa16.47■□□□□ 0.23
PMF1-202ENST00000368277 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
PMF1-202ENST00000368277 CYP2B6P20813 491 aa16.47■□□□□ 0.23
PMF1-202ENST00000368277 HERVK_113P62684 666 aa16.47■□□□□ 0.23
PMF1-202ENST00000368277 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
PMF1-202ENST00000368277 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
PMF1-202ENST00000368277 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.47■□□□□ 0.233e-7■■■■■ 42.1
PMF1-202ENST00000368277 PAK6Q9NQU5 681 aaPredicted RBP16.47■□□□□ 0.23
PMF1-202ENST00000368277 PCDH10Q9P2E7 1040 aa16.47■□□□□ 0.23
PMF1-202ENST00000368277 MORF4L1Q9UBU8 362 aa16.47■□□□□ 0.23
PMF1-202ENST00000368277 GJD2Q9UKL4 321 aa16.47■□□□□ 0.23
PMF1-202ENST00000368277 RANBP2P49792 3224 aaKnown RBP16.47■□□□□ 0.23
PMF1-202ENST00000368277 CHGBP05060 677 aa16.46■□□□□ 0.23
PMF1-202ENST00000368277 PLCD1P51178 756 aa16.46■□□□□ 0.23
PMF1-202ENST00000368277 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
PMF1-202ENST00000368277 Q3C1V9 767 aa16.46■□□□□ 0.23
PMF1-202ENST00000368277 ACER1Q8TDN7 264 aa16.46■□□□□ 0.23
PMF1-202ENST00000368277 TRIB2Q92519 343 aa16.46■□□□□ 0.23
PMF1-202ENST00000368277 RIOK1Q9BRS2 568 aaKnown RBP16.46■□□□□ 0.23
PMF1-202ENST00000368277 PORCNQ9H237 461 aa16.46■□□□□ 0.23
PMF1-202ENST00000368277 A0A0G2JMZ2 1700 aa16.45■□□□□ 0.22
PMF1-202ENST00000368277 ZNFX1Q9P2E3 1918 aaKnown RBP16.45■□□□□ 0.22
PMF1-202ENST00000368277 GOLIM4O00461 696 aa16.45■□□□□ 0.22
PMF1-202ENST00000368277 CYP2D6P10635 497 aa16.45■□□□□ 0.22
PMF1-202ENST00000368277 PDE6AP16499 860 aa16.45■□□□□ 0.22
PMF1-202ENST00000368277 HOXA7P31268 230 aaPredicted RBP16.45■□□□□ 0.22
PMF1-202ENST00000368277 RAB3GAP1Q15042 981 aa16.45■□□□□ 0.22
PMF1-202ENST00000368277 FEZ1Q99689 392 aa16.45■□□□□ 0.22
PMF1-202ENST00000368277 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
PMF1-202ENST00000368277 RBPJLQ9UBG7 517 aa16.45■□□□□ 0.22
PMF1-202ENST00000368277 SERPINB13Q9UIV8 391 aa16.45■□□□□ 0.22
PMF1-202ENST00000368277 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
PMF1-202ENST00000368277 MAGEB6P1A0A0J9YX57 407 aa16.44■□□□□ 0.22
PMF1-202ENST00000368277 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
PMF1-202ENST00000368277 HMGCRP04035 888 aa16.44■□□□□ 0.22
PMF1-202ENST00000368277 SHMT1P34896 483 aa16.44■□□□□ 0.22
PMF1-202ENST00000368277 TATDN1Q6P1N9 297 aa16.44■□□□□ 0.22
PMF1-202ENST00000368277 USP17L2Q6R6M4 530 aa16.44■□□□□ 0.22
PMF1-202ENST00000368277 LCORLQ8N3X6 602 aa16.44■□□□□ 0.22
PMF1-202ENST00000368277 SDR42E1Q8WUS8 393 aa16.44■□□□□ 0.22
PMF1-202ENST00000368277 PAWRQ96IZ0 340 aaKnown RBP16.44■□□□□ 0.22
PMF1-202ENST00000368277 HTATIP2Q9BUP3 242 aa16.44■□□□□ 0.22
PMF1-202ENST00000368277 SMIM22K7EJ46 135 aa16.43■□□□□ 0.22
PMF1-202ENST00000368277 CNMDO75829 334 aa16.43■□□□□ 0.22
PMF1-202ENST00000368277 GUCY1A2P33402 732 aa16.43■□□□□ 0.22
PMF1-202ENST00000368277 ERVK-9P63128 1117 aa16.43■□□□□ 0.22
PMF1-202ENST00000368277 ERVK-24P63145 666 aa16.43■□□□□ 0.22
PMF1-202ENST00000368277 CCL14Q16627 93 aa16.43■□□□□ 0.22
PMF1-202ENST00000368277 ABCB5Q2M3G0 1257 aa16.43■□□□□ 0.22
PMF1-202ENST00000368277 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
PMF1-202ENST00000368277 SLC9C2Q5TAH2 1124 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms