RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 FGRP09769 529 aa20.06■□□□□ 0.8
TRIM11-202ENST00000366699 GUCY1A2P33402 732 aa20.06■□□□□ 0.8
TRIM11-202ENST00000366699 ELOA2Q8IYF1 753 aaPredicted RBP20.06■□□□□ 0.8
TRIM11-202ENST00000366699 NSUN4Q96CB9 384 aaKnown RBP20.06■□□□□ 0.8
TRIM11-202ENST00000366699 NOL10Q9BSC4 688 aaKnown RBP20.06■□□□□ 0.8
TRIM11-202ENST00000366699 KCNH3Q9ULD8 1083 aa20.06■□□□□ 0.8
TRIM11-202ENST00000366699 USP27XA6NNY8 438 aa20.05■□□□□ 0.8
TRIM11-202ENST00000366699 KIF2AO00139 706 aaPredicted RBP20.05■□□□□ 0.8
TRIM11-202ENST00000366699 ZBTB22O15209 634 aa20.05■□□□□ 0.8
TRIM11-202ENST00000366699 DYNLL1P63167 89 aaKnown RBP20.05■□□□□ 0.8
TRIM11-202ENST00000366699 TMC6Q7Z403 805 aa20.05■□□□□ 0.8
TRIM11-202ENST00000366699 CLIC6Q96NY7 704 aa20.05■□□□□ 0.8
TRIM11-202ENST00000366699 CCNL1Q9UK58 526 aaPredicted RBP20.05■□□□□ 0.8
TRIM11-202ENST00000366699 MYH6P13533 1939 aa20.05■□□□□ 0.8
TRIM11-202ENST00000366699 CCDC82Q8N4S0 544 aa20.05■□□□□ 0.8
TRIM11-202ENST00000366699 COL4A1P02462 1669 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 NPHP1O15259 732 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 SFPQP23246 707 aaKnown RBP eCLIP20.04■□□□□ 0.8
TRIM11-202ENST00000366699 SPTY2D1Q68D10 685 aaPredicted RBP20.04■□□□□ 0.8
TRIM11-202ENST00000366699 KRBA2Q6ZNG9 492 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 FNBP4Q8N3X1 1017 aaPredicted RBP20.04■□□□□ 0.8
TRIM11-202ENST00000366699 ENAHQ8N8S7 591 aaPredicted RBP20.04■□□□□ 0.8
TRIM11-202ENST00000366699 CNNM3Q8NE01 707 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 ZNF592Q92610 1267 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 ATP8A2Q9NTI2 1148 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 SRP68Q9UHB9 627 aaKnown RBP20.04■□□□□ 0.8
TRIM11-202ENST00000366699 KCNJ14Q9UNX9 436 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 WTIPA6NIX2 430 aaPredicted RBP20.04■□□□□ 0.8
TRIM11-202ENST00000366699 MYO1BO43795 1136 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 LMOD1P29536 600 aaPredicted RBP20.04■□□□□ 0.8
TRIM11-202ENST00000366699 FANCCQ00597 558 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 MYL5Q02045 173 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 MECOMQ03112 1051 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 PNOCQ13519 176 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 ISM2Q6H9L7 571 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 CTR9Q6PD62 1173 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 OLFM4Q6UX06 510 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 ARID3AQ99856 593 aa20.04■□□□□ 0.8
TRIM11-202ENST00000366699 UBE2Q2LH0YL09 131 aa20.03■□□□□ 0.8
TRIM11-202ENST00000366699 KCNJ6P48051 423 aa20.03■□□□□ 0.8
TRIM11-202ENST00000366699 CBFA2T2O43439 604 aa20.03■□□□□ 0.8
TRIM11-202ENST00000366699 DDAH1O94760 285 aa20.03■□□□□ 0.8
TRIM11-202ENST00000366699 NT5C2P49902 561 aa20.03■□□□□ 0.8
TRIM11-202ENST00000366699 LONRF3Q496Y0 759 aa20.03■□□□□ 0.8
TRIM11-202ENST00000366699 PPP4R3BQ5MIZ7 849 aa20.02■□□□□ 0.8
TRIM11-202ENST00000366699 METTL16Q86W50 562 aaKnown RBP20.02■□□□□ 0.8
TRIM11-202ENST00000366699 ZNF579Q8NAF0 562 aaKnown RBP20.02■□□□□ 0.8
TRIM11-202ENST00000366699 TRMT1Q9NXH9 659 aaKnown RBP20.02■□□□□ 0.8
TRIM11-202ENST00000366699 ARPP21Q9UBL0 812 aaPredicted RBP20.02■□□□□ 0.8
TRIM11-202ENST00000366699 USP17L12C9JPN9 530 aa20.02■□□□□ 0.79
TRIM11-202ENST00000366699 USP17L21D6R901 530 aa20.02■□□□□ 0.79
TRIM11-202ENST00000366699 PRPF3O43395 683 aaKnown RBP20.02■□□□□ 0.79
TRIM11-202ENST00000366699 ORC4O43929 436 aa20.02■□□□□ 0.79
TRIM11-202ENST00000366699 NCBP1Q09161 790 aaKnown RBP20.02■□□□□ 0.79
TRIM11-202ENST00000366699 ARMCX5Q6P1M9 558 aa20.02■□□□□ 0.79
TRIM11-202ENST00000366699 HSD3B7Q9H2F3 369 aa20.02■□□□□ 0.79
TRIM11-202ENST00000366699 BRMS1Q9HCU9 246 aa20.02■□□□□ 0.79
TRIM11-202ENST00000366699 CACNA1SQ13698 1873 aa20.01■□□□□ 0.79
TRIM11-202ENST00000366699 PTPREP23469 700 aa20.01■□□□□ 0.79
TRIM11-202ENST00000366699 TOB1P50616 345 aaPredicted RBP20.01■□□□□ 0.79
TRIM11-202ENST00000366699 CMTR1Q8N1G2 835 aaKnown RBP20.01■□□□□ 0.79
TRIM11-202ENST00000366699 KIF18AQ8NI77 898 aa20.01■□□□□ 0.79
TRIM11-202ENST00000366699 ZNF384Q8TF68 577 aa20.01■□□□□ 0.79
TRIM11-202ENST00000366699 TFCP2L1Q9NZI6 479 aa20.01■□□□□ 0.79
TRIM11-202ENST00000366699 ARHGEF1Q92888 912 aaKnown RBP20.01■□□□□ 0.79
TRIM11-202ENST00000366699 CCDC34Q96HJ3 373 aa20.01■□□□□ 0.79
TRIM11-202ENST00000366699 PSDA5PKW4 1024 aaPredicted RBP20■□□□□ 0.79
TRIM11-202ENST00000366699 UBASH3AP57075 661 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 PDE4BQ07343 736 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 DUOX1Q9NRD9 1551 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 AATFQ9NY61 560 aaKnown RBP eCLIP20■□□□□ 0.79
TRIM11-202ENST00000366699 USP21Q9UK80 565 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 PCDHA5Q9Y5H7 936 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 MORC2Q9Y6X9 1032 aaPredicted RBP20■□□□□ 0.79
TRIM11-202ENST00000366699 A0A1B0GUL6 1792 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 SERPINC1P01008 464 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 KLRK1P26718 216 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 RFC4P35249 363 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 KRT2P35908 639 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 SBK1Q52WX2 424 aa20■□□□□ 0.79
TRIM11-202ENST00000366699 DCP1AQ9NPI6 582 aaPredicted RBP20■□□□□ 0.79
TRIM11-202ENST00000366699 CYP2D7A0A087X1C5 515 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 BMP15O95972 392 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 ATP1A3P13637 1013 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 KANK3Q6NY19 840 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 SMIM5Q71RC9 77 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 PTF1AQ7RTS3 328 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 CTCFLQ8NI51 663 aaPredicted RBP19.99■□□□□ 0.79
TRIM11-202ENST00000366699 FBXO2Q9UK22 296 aaPredicted RBP19.99■□□□□ 0.79
TRIM11-202ENST00000366699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.99■□□□□ 0.79
TRIM11-202ENST00000366699 SRPRBQ9Y5M8 271 aaKnown RBP19.99■□□□□ 0.79
TRIM11-202ENST00000366699 MYH2Q9UKX2 1941 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 PRDM1O75626 825 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 TUBB4AP04350 444 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 MDM2Q00987 491 aaPredicted RBP19.99■□□□□ 0.79
TRIM11-202ENST00000366699 NR5A1Q13285 461 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 TRAPPC3LQ5T215 181 aa19.99■□□□□ 0.79
TRIM11-202ENST00000366699 E4F1Q66K89 784 aaPredicted RBP19.99■□□□□ 0.79
TRIM11-202ENST00000366699 DZIP1Q86YF9 867 aaKnown RBP19.99■□□□□ 0.79
TRIM11-202ENST00000366699 FOXP4Q8IVH2 680 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms