RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 CALM1P0DP23 149 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 CALM2P0DP24 149 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 CALM3P0DP25 149 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 AKAP17AQ02040 695 aaKnown RBP30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 VPS72Q15906 364 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 CATIPQ7Z7H3 387 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 CCDC150Q8NCX0 1101 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 ZBTB22O15209 634 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 MYO1BO43795 1136 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 TNNT1P13805 278 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 MYL5Q02045 173 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 IFIT1BQ5T764 474 aaKnown RBP30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 SETDB2Q96T68 719 aa30.3■■■□□ 2.44
CUEDC1-201ENST00000360238 NR5A1Q13285 461 aa30.29■■■□□ 2.44
CUEDC1-201ENST00000360238 CTR9Q6PD62 1173 aa30.29■■■□□ 2.44
CUEDC1-201ENST00000360238 SMIM22K7EJ46 135 aa30.28■■■□□ 2.44
CUEDC1-201ENST00000360238 DDAH1O94760 285 aa30.28■■■□□ 2.44
CUEDC1-201ENST00000360238 KCNQ4P56696 695 aa30.28■■■□□ 2.44
CUEDC1-201ENST00000360238 FUT2Q10981 343 aa30.28■■■□□ 2.44
CUEDC1-201ENST00000360238 NBPF5PQ86XG9 351 aaPredicted RBP30.28■■■□□ 2.44
CUEDC1-201ENST00000360238 HSD3B7Q9H2F3 369 aa30.28■■■□□ 2.44
CUEDC1-201ENST00000360238 PAXBP1Q9Y5B6 917 aa30.28■■■□□ 2.44
CUEDC1-201ENST00000360238 PRPF3O43395 683 aaKnown RBP30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 ORC4O43929 436 aa30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 MECOMQ03112 1051 aa30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 OLFM4Q6UX06 510 aa30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 PCDHB6Q9Y5E3 794 aa30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 SRPRBQ9Y5M8 271 aaKnown RBP30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 CYP2D7A0A087X1C5 515 aa30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 CTIFO43310 598 aaKnown RBP30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 KLRK1P26718 216 aa30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 HIBADHP31937 336 aaKnown RBP30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 OXER1Q8TDS5 423 aa30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 TAF1LQ8IZX4 1826 aa30.27■■■□□ 2.44
CUEDC1-201ENST00000360238 FANCCQ00597 558 aa30.26■■■□□ 2.43
CUEDC1-201ENST00000360238 MDM2Q00987 491 aaPredicted RBP30.26■■■□□ 2.43
CUEDC1-201ENST00000360238 CRNKL1Q9BZJ0 848 aaKnown RBP30.26■■■□□ 2.43
CUEDC1-201ENST00000360238 PKN1Q16512 942 aa30.25■■■□□ 2.43
CUEDC1-201ENST00000360238 ISM2Q6H9L7 571 aa30.25■■■□□ 2.43
CUEDC1-201ENST00000360238 TMC6Q7Z403 805 aa30.25■■■□□ 2.43
CUEDC1-201ENST00000360238 PHF20Q9BVI0 1012 aa30.25■■■□□ 2.43
CUEDC1-201ENST00000360238 PCDHA5Q9Y5H7 936 aa30.25■■■□□ 2.43
CUEDC1-201ENST00000360238 LMOD1P29536 600 aaPredicted RBP30.25■■■□□ 2.43
CUEDC1-201ENST00000360238 TROAPQ12815 778 aa30.25■■■□□ 2.43
CUEDC1-201ENST00000360238 ZPR1O75312 459 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 ATP8A2Q9NTI2 1148 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 SRP68Q9UHB9 627 aaKnown RBP30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 USP17L12C9JPN9 530 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 USP17L21D6R901 530 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 CBFA2T2O43439 604 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 KRT2P35908 639 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 TPTE2Q6XPS3 522 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 NYAP1Q6ZVC0 841 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 FOXP4Q8IVH2 680 aaPredicted RBP30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 ZNF710Q8N1W2 664 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 SBF2Q86WG5 1849 aa30.24■■■□□ 2.43
CUEDC1-201ENST00000360238 TNRC6CQ9HCJ0 1690 aaKnown RBP30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 GRIN1Q05586 938 aa30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 POSTNQ15063 836 aa30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 NT5DC1Q5TFE4 455 aa30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 SHISA4Q96DD7 197 aa30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 CABP5Q9NP86 173 aa30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 DCP1AQ9NPI6 582 aaPredicted RBP30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 ARPP21Q9UBL0 812 aaPredicted RBP30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 THSD7AQ9UPZ6 1657 aa30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 LY75O60449 1722 aa30.23■■■□□ 2.43
CUEDC1-201ENST00000360238 KCNJ6P48051 423 aa30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 SPECC1Q5M775 1068 aa30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 TSC1Q92574 1164 aa30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 GNPATO15228 680 aa30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 PRDM1O75626 825 aa30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 GLIPR1L2Q4G1C9 344 aa30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 KANK3Q6NY19 840 aa30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 TMTC3Q6ZXV5 915 aa30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 CCAR2Q8N163 923 aaKnown RBP30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 VPS54Q9P1Q0 977 aa30.22■■■□□ 2.43
CUEDC1-201ENST00000360238 USP27XA6NNY8 438 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 PLEKHA8P1O95397 391 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 SFPQP23246 707 aaKnown RBP eCLIP30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 CEP135Q66GS9 1140 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 TRIM75PA6NK02 468 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 TOM1O60784 492 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 IGSF3O75054 1194 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 ATP1A3P13637 1013 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 SBK1Q52WX2 424 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 ARMCX5Q6P1M9 558 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 SMIM5Q71RC9 77 aa30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 AATFQ9NY61 560 aaKnown RBP eCLIP30.21■■■□□ 2.43
CUEDC1-201ENST00000360238 POLR2DO15514 142 aaKnown RBP30.2■■■□□ 2.43
CUEDC1-201ENST00000360238 BMP15O95972 392 aa30.2■■■□□ 2.43
CUEDC1-201ENST00000360238 TRIML1Q8N9V2 468 aa30.2■■■□□ 2.43
CUEDC1-201ENST00000360238 BRMS1Q9HCU9 246 aa30.2■■■□□ 2.43
CUEDC1-201ENST00000360238 TFCP2L1Q9NZI6 479 aa30.2■■■□□ 2.43
CUEDC1-201ENST00000360238 NRDCO43847 1150 aa30.2■■■□□ 2.42
CUEDC1-201ENST00000360238 PTPN14Q15678 1187 aa30.2■■■□□ 2.42
CUEDC1-201ENST00000360238 PTF1AQ7RTS3 328 aa30.2■■■□□ 2.42
CUEDC1-201ENST00000360238 IRS2Q9Y4H2 1338 aa30.2■■■□□ 2.42
CUEDC1-201ENST00000360238 CNTNAP5Q8WYK1 1306 aa30.19■■■□□ 2.42
CUEDC1-201ENST00000360238 PIP4K2BP78356 416 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms