RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SSC5DA1L4H1 1573 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 RASSF10A6NK89 507 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 FAM196BA6NMK8 535 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 PHF20L1A8MW92 1017 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 RASA1P20936 1047 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 NT5C2P49902 561 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 TRIM34Q9BYJ4 488 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 ZNF341Q9BYN7 854 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 CNNM2Q9H8M5 875 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 MKNK2Q9HBH9 465 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 ZNF112Q9UJU3 913 aa14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 ABT1Q9ULW3 272 aaKnown RBP14.69□□□□□ -0.06
NIF3L1-201ENST00000359683 USP2O75604 605 aaPredicted RBP14.68□□□□□ -0.06
NIF3L1-201ENST00000359683 PRDM1O75626 825 aa14.68□□□□□ -0.06
NIF3L1-201ENST00000359683 NF2P35240 595 aa14.68□□□□□ -0.06
NIF3L1-201ENST00000359683 FMR1Q06787 632 aaKnown RBP eCLIP14.68□□□□□ -0.06
NIF3L1-201ENST00000359683 ADCK5Q3MIX3 580 aa14.68□□□□□ -0.06
NIF3L1-201ENST00000359683 KRT23Q9C075 422 aa14.68□□□□□ -0.06
NIF3L1-201ENST00000359683 NEDD4P46934 1319 aa14.68□□□□□ -0.06
NIF3L1-201ENST00000359683 PPP1R12BO60237 982 aaPredicted RBP14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 TRDNQ13061 729 aa14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 RRP1BQ14684 758 aaKnown RBP14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 ZNF444Q8N0Y2 327 aaPredicted RBP14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 NCOA7Q8NI08 942 aa14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 NKX2-3Q8TAU0 364 aa14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 CCDC17Q96LX7 622 aa14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 NEK1Q96PY6 1258 aa14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 KIF2CQ99661 725 aa14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 TM6SF1Q9BZW5 370 aa14.67□□□□□ -0.06
NIF3L1-201ENST00000359683 B4E1Z4 1266 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 MAP3K11Q16584 847 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 DEFB115Q30KQ5 88 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 CERKLQ49MI3 558 aaPredicted RBP14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 ESR2Q92731 530 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 ZSWIM5Q9P217 1185 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 RANBP6O60518 1105 aaKnown RBP14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 PSMA5P28066 241 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 CAP2P40123 477 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 RRP12Q5JTH9 1297 aaKnown RBP14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 MB21D2Q8IYB1 491 aaPredicted RBP14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 JAKMIP1Q96N16 626 aaKnown RBP14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 ZSWIM6Q9HCJ5 1215 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 TOMM22Q9NS69 142 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 FZD1Q9UP38 647 aa14.66□□□□□ -0.06
NIF3L1-201ENST00000359683 CTNND1O60716 968 aaKnown RBP14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 KDM4AO75164 1064 aa14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 HMGB1P09429 215 aaKnown RBP14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 AKR1B1P15121 316 aa14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 TFAP4Q01664 338 aa14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 COL9A3Q14050 684 aaPredicted RBP14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 FAM47AQ5JRC9 791 aa14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 CST9Q5W186 159 aa14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 PAXIP1Q6ZW49 1069 aaPredicted RBP14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 RALYLQ86SE5 291 aaKnown RBP14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 NEDD1Q8NHV4 660 aa14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 GINM1Q9NU53 330 aa14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 WDR33Q9C0J8 1336 aaKnown RBP14.65□□□□□ -0.06
NIF3L1-201ENST00000359683 CELF2O95319 508 aaKnown RBP14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 INPP5BP32019 993 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 IREB2P48200 963 aaKnown RBP14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 CTCFP49711 727 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 FKBP1BP68106 108 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 JAG1P78504 1218 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 MAP3K9P80192 1104 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 EXOSC10Q01780 885 aaKnown RBP14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 PRKG1Q13976 671 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 ABCB5Q2M3G0 1257 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 CYB5R4Q7L1T6 521 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 DHX32Q7L7V1 743 aaKnown RBP14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 ARMC9Q7Z3E5 817 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 WRNIP1Q96S55 665 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 TCP11L1Q9NUJ3 509 aa14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 ANGEL1Q9UNK9 670 aaKnown RBP14.64□□□□□ -0.07
NIF3L1-201ENST00000359683 MYH8P13535 1937 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 TSPY2A6NKD2 308 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 TSPY3P0CV98 308 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 TSPY8P0CW00 308 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 GUCY1A2P33402 732 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 MCM5P33992 734 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 ANTXR2P58335 489 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 NOL9Q5SY16 702 aaKnown RBP14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 LDLRAD1Q5T700 205 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 BLOC1S2Q6QNY1 142 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 ZNF408Q9H9D4 720 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 GBA2Q9HCG7 927 aaPredicted RBP14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 PRDM10Q9NQV6 1147 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 WBP1LQ9NX94 342 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 WDR19Q8NEZ3 1342 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 PLIN4Q96Q06 1357 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 IGKV6D-41A0A0C4DH26 115 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 UNCXA6NJT0 531 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 GDF11O95390 407 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 GH2P01242 217 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 ASNSP08243 561 aa14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 CASTP20810 708 aaKnown RBP14.63□□□□□ -0.07
NIF3L1-201ENST00000359683 GRM1Q13255 1194 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms