RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 AKAP17AQ02040 695 aaKnown RBP9.84□□□□□ -0.83
RFX3-202ENST00000358730 DMTNQ08495 405 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 ELOA2Q8IYF1 753 aaPredicted RBP9.84□□□□□ -0.83
RFX3-202ENST00000358730 TRMT44Q8IYL2 757 aaKnown RBP9.84□□□□□ -0.83
RFX3-202ENST00000358730 GRAMD1CQ8IYS0 662 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 L2HGDHQ9H9P8 463 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 CABP5Q9NP86 173 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 INTS13Q9NVM9 706 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 NFE2L3Q9Y4A8 694 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 FMR1Q06787 632 aaKnown RBP eCLIP9.84□□□□□ -0.83
RFX3-202ENST00000358730 KMT5BQ4FZB7 885 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 RNF26Q9BY78 433 aaPredicted RBP9.84□□□□□ -0.83
RFX3-202ENST00000358730 DUOX1Q9NRD9 1551 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 VPS54Q9P1Q0 977 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 DACH1Q9UI36 760 aa9.84□□□□□ -0.83
RFX3-202ENST00000358730 COL1A1P02452 1464 aaPredicted RBP9.83□□□□□ -0.84
RFX3-202ENST00000358730 LOC102724428A0A0B4J2F2 783 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 SMIM22K7EJ46 135 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 NPHP1O15259 732 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 GYG1P46976 350 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 SIK1P57059 783 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 FBXO38Q6PIJ6 1188 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 ZNF579Q8NAF0 562 aaKnown RBP9.83□□□□□ -0.84
RFX3-202ENST00000358730 CDC5LQ99459 802 aaKnown RBP9.83□□□□□ -0.84
RFX3-202ENST00000358730 CSRNP2Q9H175 543 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 DNAI1Q9UI46 699 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 DDX41Q9UJV9 622 aaKnown RBP9.83□□□□□ -0.84
RFX3-202ENST00000358730 PRDM4Q9UKN5 801 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 SRPRBQ9Y5M8 271 aaKnown RBP9.83□□□□□ -0.84
RFX3-202ENST00000358730 A0A1B0GUL6 1792 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 ACTN4O43707 911 aaKnown RBP9.83□□□□□ -0.84
RFX3-202ENST00000358730 TUBB4AP04350 444 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 XBP1P17861 261 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 CDK11BP21127 795 aaKnown RBP9.83□□□□□ -0.84
RFX3-202ENST00000358730 ETF1P62495 437 aaKnown RBP9.83□□□□□ -0.84
RFX3-202ENST00000358730 ITPK1Q13572 414 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 SEC23AQ15436 765 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 NT5DC1Q5TFE4 455 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 MLKLQ8NB16 471 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 TMX1Q9H3N1 280 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 RREB1Q92766 1687 aa9.83□□□□□ -0.84
RFX3-202ENST00000358730 ZNF804BA4D1E1 1349 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 PHLPP2Q6ZVD8 1323 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 hCG_1642624A0A1W2PR95 340 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 FAM205CA6NFA0 338 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 MORC3Q14149 939 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 USP49Q70CQ1 688 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 ENAHQ8N8S7 591 aaPredicted RBP9.82□□□□□ -0.84
RFX3-202ENST00000358730 GNL3LQ9NVN8 582 aaKnown RBP9.82□□□□□ -0.84
RFX3-202ENST00000358730 ANAPC4Q9UJX5 808 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 TAF1P21675 1872 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 CYP2D7A0A087X1C5 515 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 TRIM75PA6NK02 468 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 PRDM1O75626 825 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 KRT2P35908 639 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 SARSP49591 514 aaKnown RBP9.82□□□□□ -0.84
RFX3-202ENST00000358730 DDB1Q16531 1140 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 IFIT1BQ5T764 474 aaKnown RBP9.82□□□□□ -0.84
RFX3-202ENST00000358730 UTP14CQ5TAP6 766 aaKnown RBP9.82□□□□□ -0.84
RFX3-202ENST00000358730 KANK3Q6NY19 840 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 TRIML1Q8N9V2 468 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 LRRN4CLQ8ND94 238 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 SHISA4Q96DD7 197 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
RFX3-202ENST00000358730 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.82□□□□□ -0.84
RFX3-202ENST00000358730 SCN7AQ01118 1682 aa9.82□□□□□ -0.84
RFX3-202ENST00000358730 ARHGAP6O43182 974 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 ZNF18P17022 549 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 ERCC6LQ2NKX8 1250 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 CCDC93Q567U6 631 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 CATIPQ7Z7H3 387 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 ENOX1Q8TC92 643 aaKnown RBP9.81□□□□□ -0.84
RFX3-202ENST00000358730 DHX58Q96C10 678 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 RIOK1Q9BRS2 568 aaKnown RBP9.81□□□□□ -0.84
RFX3-202ENST00000358730 NOL10Q9BSC4 688 aaKnown RBP9.81□□□□□ -0.84
RFX3-202ENST00000358730 ZNF652Q9Y2D9 606 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 CASZ1Q86V15 1759 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 WTIPA6NIX2 430 aaPredicted RBP9.81□□□□□ -0.84
RFX3-202ENST00000358730 PLEKHA8P1O95397 391 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 DYNLL1P63167 89 aaKnown RBP9.81□□□□□ -0.84
RFX3-202ENST00000358730 PPP2R5BQ15173 497 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 SPECC1LQ69YQ0 1117 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 FCHSD1Q86WN1 690 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 TMEM139Q8IV31 216 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
RFX3-202ENST00000358730 ANKRD18AQ8IVF6 992 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 CCDC34Q96HJ3 373 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 BAG1Q99933 345 aaPredicted RBP9.81□□□□□ -0.84
RFX3-202ENST00000358730 GTPBP4Q9BZE4 634 aaKnown RBP9.81□□□□□ -0.84
RFX3-202ENST00000358730 ZSCAN12O43309 604 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 PLCD1P51178 756 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 PKN1Q16512 942 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 IQCA1Q86XH1 822 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 PHF20Q9BVI0 1012 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 SAMSN1Q9NSI8 373 aaKnown RBP9.81□□□□□ -0.84
RFX3-202ENST00000358730 AATFQ9NY61 560 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFX3-202ENST00000358730 PPP2R2CQ9Y2T4 447 aa9.81□□□□□ -0.84
RFX3-202ENST00000358730 AFMP43652 599 aa9.8□□□□□ -0.84
RFX3-202ENST00000358730 TBX2Q13207 712 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms