RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CPA1P15085 419 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 GJC1P36383 396 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 ASIC3Q9UHC3 531 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 CDC23Q9UJX2 597 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 PKP1Q13835 747 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 NBPF9Q3BBW0 867 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 MGARPQ8TDB4 240 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 SAMM50Q9Y512 469 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 GOLGA4Q13439 2230 aaKnown RBP9.72□□□□□ -0.85
COL6A6-201ENST00000358511 RNF113AO15541 343 aaKnown RBP9.72□□□□□ -0.85
COL6A6-201ENST00000358511 TSPY3P0CV98 308 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 TSPY8P0CW00 308 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 KRT79Q5XKE5 535 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 MPRIPQ6WCQ1 1025 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 KLHL7Q8IXQ5 586 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 MSANTD4Q8NCY6 345 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 ARL1P40616 181 aaPredicted RBP9.72□□□□□ -0.85
COL6A6-201ENST00000358511 HELLSQ9NRZ9 838 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 ERBB4Q15303 1308 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 CENPKQ9BS16 269 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 SPTLC3Q9NUV7 552 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 SEC31AO94979 1220 aaKnown RBP9.72□□□□□ -0.85
COL6A6-201ENST00000358511 IRX5P78411 483 aaPredicted RBP9.72□□□□□ -0.85
COL6A6-201ENST00000358511 ANGEL1Q9UNK9 670 aaKnown RBP9.72□□□□□ -0.85
COL6A6-201ENST00000358511 HYOU1Q9Y4L1 999 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 CEP104O60308 925 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 IL15P40933 162 aaPredicted RBP9.72□□□□□ -0.85
COL6A6-201ENST00000358511 EPHB4P54760 987 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 FBXO18Q8NFZ0 1043 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 NELFBQ8WX92 580 aa9.72□□□□□ -0.85
COL6A6-201ENST00000358511 CNOT10Q9H9A5 744 aaKnown RBP9.72□□□□□ -0.85
COL6A6-201ENST00000358511 SV2BQ7L1I2 683 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 SHANK2Q9UPX8 1470 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 CCDC169A6NNP5 214 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 TRAF5O00463 557 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 DEXIO95424 95 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 GAS8O95995 478 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 AFAP1L2Q8N4X5 818 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 TSC22D3Q99576 134 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 MAK16Q9BXY0 300 aaKnown RBP9.71□□□□□ -0.85
COL6A6-201ENST00000358511 KRT15P19012 456 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 P3H4Q92791 437 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 TM6SF1Q9BZW5 370 aa9.71□□□□□ -0.85
COL6A6-201ENST00000358511 TCP1P17987 556 aaKnown RBP9.71□□□□□ -0.86
COL6A6-201ENST00000358511 PNOCQ13519 176 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 CCDC65Q8IXS2 484 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 HAUS4Q9H6D7 363 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 TXLNGQ9NUQ3 528 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 ADGRL1O94910 1474 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 SH3BP5O60239 455 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 CCDC152Q4G0S7 254 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 OR8K1Q8NGG5 319 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 EIF3CLB5ME19 914 aaKnown RBP9.71□□□□□ -0.86
COL6A6-201ENST00000358511 SFMBT2Q5VUG0 894 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 EIF3CQ99613 913 aaKnown RBP9.71□□□□□ -0.86
COL6A6-201ENST00000358511 PTPRKQ15262 1439 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 MYO5CQ9NQX4 1742 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 ADGRF5Q8IZF2 1346 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 LDHAL6AQ6ZMR3 332 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 CCDC105Q8IYK2 499 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 KDM5BQ9UGL1 1544 aa9.71□□□□□ -0.86
COL6A6-201ENST00000358511 C2CD5Q86YS7 1000 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 TCP11Q8WWU5 503 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 TTC19Q6DKK2 380 aaPredicted RBP9.7□□□□□ -0.86
COL6A6-201ENST00000358511 TRIML1Q8N9V2 468 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 OTUD7AQ8TE49 926 aaPredicted RBP9.7□□□□□ -0.86
COL6A6-201ENST00000358511 C6orf50Q9HD87 102 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 FAM13AO94988 1023 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 KCTD16Q68DU8 428 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 CCHCR1Q8TD31 782 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 VAT1LQ9HCJ6 419 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 CABP5Q9NP86 173 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 SLC9C2Q5TAH2 1124 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 ALS2CLQ60I27 953 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.7□□□□□ -0.86
COL6A6-201ENST00000358511 PLEKHA4Q9H4M7 779 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 SLC4A4Q9Y6R1 1079 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 GPATCH8Q9UKJ3 1502 aaKnown RBP9.7□□□□□ -0.86
COL6A6-201ENST00000358511 ITIH3Q06033 890 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 TYW1BQ6NUM6 668 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 ATP2A3Q93084 1043 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 TRMT112Q9UI30 125 aaKnown RBP9.7□□□□□ -0.86
COL6A6-201ENST00000358511 KCNJ18B7U540 433 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 KCNJ12Q14500 433 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 E2F5Q15329 346 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 BEND3Q5T5X7 828 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 ADAM21Q9UKJ8 722 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 TMOD2Q9NZR1 351 aa9.7□□□□□ -0.86
COL6A6-201ENST00000358511 WASLO00401 505 aaPredicted RBP9.69□□□□□ -0.86
COL6A6-201ENST00000358511 CHUKO15111 745 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 SAAL1Q96ER3 474 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 KRIT1O00522 736 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 TBC1D8O95759 1140 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 SKIP12755 728 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 PRR16Q569H4 304 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 KSR2Q6VAB6 950 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 FBXO41Q8TF61 875 aa9.69□□□□□ -0.86
COL6A6-201ENST00000358511 PBRM1Q86U86 1689 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms