RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CLEC17AQ6ZS10 378 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 ARHGAP27Q6ZUM4 889 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 ZNF654Q8IZM8 581 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 EHD4Q9H223 541 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 DHX36Q9H2U1 1008 aaKnown RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 IL17RBQ9NRM6 502 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 FAM217BQ9NTX9 383 aaPredicted RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 TCP11L1Q9NUJ3 509 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 SERPINB13Q9UIV8 391 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 ENTPD3O75355 529 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 RXRAP19793 462 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 LMNB1P20700 586 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 EIF6P56537 245 aaKnown RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 ZNF280AP59817 542 aaPredicted RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 HMGN5P82970 282 aaKnown RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 IFIT1BQ5T764 474 aaKnown RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 RCSD1Q6JBY9 416 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 SH3BP5LQ7L8J4 393 aa19.97■□□□□ 0.79
TPM1-205ENST00000357980 ZNF444Q8N0Y2 327 aaPredicted RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 GREB1LQ9C091 1923 aaPredicted RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 WDR33Q9C0J8 1336 aaKnown RBP19.97■□□□□ 0.79
TPM1-205ENST00000357980 HLA-DOAP06340 250 aa19.96■□□□□ 0.79
TPM1-205ENST00000357980 CDC27P30260 824 aa19.96■□□□□ 0.79
TPM1-205ENST00000357980 SPDYE2Q495Y8 402 aa19.96■□□□□ 0.79
TPM1-205ENST00000357980 ZNF541Q9H0D2 1346 aa19.96■□□□□ 0.79
TPM1-205ENST00000357980 PLIN4Q96Q06 1357 aa19.96■□□□□ 0.79
TPM1-205ENST00000357980 SHTN1A0MZ66 631 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 DDTLA6NHG4 134 aaPredicted RBP19.95■□□□□ 0.78
TPM1-205ENST00000357980 GOLGA8AA7E2F4 631 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 TSPY3P0CV98 308 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 TSPY8P0CW00 308 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 PDCP20941 246 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 SYNE3Q6ZMZ3 975 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 ANKS1AQ92625 1134 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 DDX11Q96FC9 970 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 ZNF70Q9UC06 446 aaPredicted RBP19.95■□□□□ 0.78
TPM1-205ENST00000357980 SWAP70Q9UH65 585 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 PDIA4P13667 645 aaKnown RBP19.95■□□□□ 0.78
TPM1-205ENST00000357980 YBX3P16989 372 aaKnown RBP eCLIP19.95■□□□□ 0.78
TPM1-205ENST00000357980 ADD1P35611 737 aaKnown RBP19.95■□□□□ 0.78
TPM1-205ENST00000357980 LARP1BQ659C4 914 aaKnown RBP19.95■□□□□ 0.78
TPM1-205ENST00000357980 DPF2Q92785 391 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 MYOZ2Q9NPC6 264 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 MTMR6Q9Y217 621 aa19.95■□□□□ 0.78
TPM1-205ENST00000357980 FDPSP14324 419 aaKnown RBP19.94■□□□□ 0.78
TPM1-205ENST00000357980 SHMT1P34896 483 aa19.94■□□□□ 0.78
TPM1-205ENST00000357980 GMPSP49915 693 aaPredicted RBP19.94■□□□□ 0.78
TPM1-205ENST00000357980 NTRK3Q16288 839 aa19.94■□□□□ 0.78
TPM1-205ENST00000357980 FKBP1CQ5VVH2 108 aa19.94■□□□□ 0.78
TPM1-205ENST00000357980 DGKHQ86XP1 1220 aa19.94■□□□□ 0.78
TPM1-205ENST00000357980 CCDC144CPQ8IYA2 1237 aa19.94■□□□□ 0.78
TPM1-205ENST00000357980 NEDD1Q8NHV4 660 aa19.94■□□□□ 0.78
TPM1-205ENST00000357980 DNAJC18Q9H819 358 aa19.94■□□□□ 0.78
TPM1-205ENST00000357980 TMOD2Q9NZR1 351 aa19.94■□□□□ 0.78
TPM1-205ENST00000357980 TAOK2Q9UL54 1235 aa19.94■□□□□ 0.78
TPM1-205ENST00000357980 CLRN2A0PK11 232 aa19.93■□□□□ 0.78
TPM1-205ENST00000357980 WNT10BO00744 389 aa19.93■□□□□ 0.78
TPM1-205ENST00000357980 CPLX1O14810 134 aa19.93■□□□□ 0.78
TPM1-205ENST00000357980 ZSCAN22P10073 491 aaPredicted RBP19.93■□□□□ 0.78
TPM1-205ENST00000357980 TROAPQ12815 778 aa19.93■□□□□ 0.78
TPM1-205ENST00000357980 CCDC178Q5BJE1 867 aa19.93■□□□□ 0.78
TPM1-205ENST00000357980 METTL16Q86W50 562 aaKnown RBP19.93■□□□□ 0.78
TPM1-205ENST00000357980 PI4KBQ9UBF8 816 aa19.93■□□□□ 0.78
TPM1-205ENST00000357980 CNTNAP1P78357 1384 aa19.93■□□□□ 0.78
TPM1-205ENST00000357980 RTN1Q16799 776 aa19.92■□□□□ 0.78
TPM1-205ENST00000357980 FOXD4L5Q5VV16 416 aaPredicted RBP19.92■□□□□ 0.78
TPM1-205ENST00000357980 CATIPQ7Z7H3 387 aa19.92■□□□□ 0.78
TPM1-205ENST00000357980 FANCBQ8NB91 859 aa19.92■□□□□ 0.78
TPM1-205ENST00000357980 FOXD4L4Q8WXT5 416 aaPredicted RBP19.92■□□□□ 0.78
TPM1-205ENST00000357980 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.92■□□□□ 0.78
TPM1-205ENST00000357980 PPFIA3O75145 1194 aa19.92■□□□□ 0.78
TPM1-205ENST00000357980 DDAH1O94760 285 aa19.92■□□□□ 0.78
TPM1-205ENST00000357980 NOVP48745 357 aa19.92■□□□□ 0.78
TPM1-205ENST00000357980 GBP4Q96PP9 640 aa19.92■□□□□ 0.78
TPM1-205ENST00000357980 KIF3AQ9Y496 699 aa19.92■□□□□ 0.78
TPM1-205ENST00000357980 GJA3Q9Y6H8 435 aa19.92■□□□□ 0.78
TPM1-205ENST00000357980 TCP10L2B9ZVM9 353 aa19.91■□□□□ 0.78
TPM1-205ENST00000357980 CDKL5O76039 1030 aa19.91■□□□□ 0.78
TPM1-205ENST00000357980 BAG4O95429 457 aaKnown RBP19.91■□□□□ 0.78
TPM1-205ENST00000357980 EGFRP00533 1210 aa19.91■□□□□ 0.78
TPM1-205ENST00000357980 MCM4P33991 863 aa19.91■□□□□ 0.78
TPM1-205ENST00000357980 NBR1Q14596 966 aa19.91■□□□□ 0.78
TPM1-205ENST00000357980 PPP2R5BQ15173 497 aa19.91■□□□□ 0.78
TPM1-205ENST00000357980 NBPF9Q3BBW0 867 aa19.91■□□□□ 0.78
TPM1-205ENST00000357980 ZSCAN29Q8IWY8 852 aaPredicted RBP19.91■□□□□ 0.78
TPM1-205ENST00000357980 MICALL2Q8IY33 904 aa19.91■□□□□ 0.78
TPM1-205ENST00000357980 FAM184AQ8NB25 1140 aa19.91■□□□□ 0.78
TPM1-205ENST00000357980 CALM1P0DP23 149 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 CALM2P0DP24 149 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 CALM3P0DP25 149 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 SLURP2P0DP57 97 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 CPLX2Q6PUV4 134 aaKnown RBP19.9■□□□□ 0.78
TPM1-205ENST00000357980 CDC37L1Q7L3B6 337 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 NUP133Q8WUM0 1156 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 FAM151AQ8WW52 585 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 MYH6P13533 1939 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 IGKV6D-41A0A0C4DH26 115 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 CCDC196A0A1B0GTZ2 297 aa19.9■□□□□ 0.78
TPM1-205ENST00000357980 VPS37CA5D8V6 355 aaPredicted RBP19.9■□□□□ 0.78
TPM1-205ENST00000357980 MYO1BO43795 1136 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms