RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 CCDC82Q8N4S0 544 aa30.15■■■□□ 2.42
C1orf228-201ENST00000357508 CRAMP1Q96RY5 1269 aa30.15■■■□□ 2.42
C1orf228-201ENST00000357508 PTMAP06454 111 aaKnown RBP30.14■■■□□ 2.42
C1orf228-201ENST00000357508 NDUFA8P51970 172 aa30.14■■■□□ 2.42
C1orf228-201ENST00000357508 BBOX1O75936 387 aa30.14■■■□□ 2.42
C1orf228-201ENST00000357508 SLC3A2P08195 630 aaKnown RBP30.14■■■□□ 2.42
C1orf228-201ENST00000357508 GGA1Q9UJY5 639 aa30.14■■■□□ 2.42
C1orf228-201ENST00000357508 SRGNP10124 158 aa30.13■■■□□ 2.41
C1orf228-201ENST00000357508 PTPAQ15257 358 aa30.13■■■□□ 2.41
C1orf228-201ENST00000357508 CATIPQ7Z7H3 387 aa30.13■■■□□ 2.41
C1orf228-201ENST00000357508 MAP3K14Q99558 947 aa30.13■■■□□ 2.41
C1orf228-201ENST00000357508 RNF26Q9BY78 433 aaPredicted RBP30.13■■■□□ 2.41
C1orf228-201ENST00000357508 DNAJC25Q9H1X3 360 aa30.13■■■□□ 2.41
C1orf228-201ENST00000357508 CD209Q9NNX6 404 aa30.13■■■□□ 2.41
C1orf228-201ENST00000357508 MKRN1Q9UHC7 482 aaKnown RBP30.13■■■□□ 2.41
C1orf228-201ENST00000357508 PDE6BP35913 854 aa30.13■■■□□ 2.41
C1orf228-201ENST00000357508 GSTO1P78417 241 aa30.13■■■□□ 2.41
C1orf228-201ENST00000357508 PLCB2Q00722 1185 aa30.12■■■□□ 2.41
C1orf228-201ENST00000357508 MCM9Q9NXL9 1143 aa30.12■■■□□ 2.41
C1orf228-201ENST00000357508 KCNJ14Q9UNX9 436 aa30.12■■■□□ 2.41
C1orf228-201ENST00000357508 WDHD1O75717 1129 aaPredicted RBP30.11■■■□□ 2.41
C1orf228-201ENST00000357508 CAVIN2O95810 425 aa30.11■■■□□ 2.41
C1orf228-201ENST00000357508 TROAPQ12815 778 aa30.11■■■□□ 2.41
C1orf228-201ENST00000357508 DIXDC1Q155Q3 683 aa30.11■■■□□ 2.41
C1orf228-201ENST00000357508 NOSTRINQ8IVI9 506 aa30.11■■■□□ 2.41
C1orf228-201ENST00000357508 PODXL2Q9NZ53 605 aa30.11■■■□□ 2.41
C1orf228-201ENST00000357508 PPP6R2O75170 966 aa30.11■■■□□ 2.41
C1orf228-201ENST00000357508 ZNF165P49910 485 aa30.11■■■□□ 2.41
C1orf228-201ENST00000357508 SAFBQ15424 915 aaKnown RBP eCLIP30.11■■■□□ 2.41
C1orf228-201ENST00000357508 DIS3L2Q8IYB7 885 aaKnown RBP30.11■■■□□ 2.41
C1orf228-201ENST00000357508 SH3RF3Q8TEJ3 882 aaPredicted RBP30.11■■■□□ 2.41
C1orf228-201ENST00000357508 BTBD18B2RXH4 712 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 USP17L8P0C7I0 530 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 IL1R1P14778 569 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 CMA1P23946 247 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 MARCKSP29966 332 aaPredicted RBP30.1■■■□□ 2.41
C1orf228-201ENST00000357508 PDE4BQ07343 736 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 FUT2Q10981 343 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 MROH7-TTC4A0A0A0MT08 1334 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 DDAH1O94760 285 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 CALM1P0DP23 149 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 CALM2P0DP24 149 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 CALM3P0DP25 149 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 PPP4CP60510 307 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 STX1AQ16623 288 aa30.1■■■□□ 2.41
C1orf228-201ENST00000357508 RBM28Q9NW13 759 aaKnown RBP30.1■■■□□ 2.41
C1orf228-201ENST00000357508 NPR1P16066 1061 aa30.09■■■□□ 2.41
C1orf228-201ENST00000357508 FAM47AQ5JRC9 791 aa30.09■■■□□ 2.41
C1orf228-201ENST00000357508 FOXP1Q9H334 677 aaPredicted RBP30.09■■■□□ 2.41
C1orf228-201ENST00000357508 NMT2O60551 498 aa30.08■■■□□ 2.41
C1orf228-201ENST00000357508 USP5P45974 858 aa30.08■■■□□ 2.41
C1orf228-201ENST00000357508 C12orf60Q5U649 245 aa30.08■■■□□ 2.41
C1orf228-201ENST00000357508 JMYQ8N9B5 988 aa30.08■■■□□ 2.41
C1orf228-201ENST00000357508 BAG3O95817 575 aa30.08■■■□□ 2.41
C1orf228-201ENST00000357508 TBC1D16Q8TBP0 767 aa30.08■■■□□ 2.41
C1orf228-201ENST00000357508 LDHCP07864 332 aa30.07■■■□□ 2.4
C1orf228-201ENST00000357508 UPF1Q92900 1129 aaKnown RBP eCLIP30.07■■■□□ 2.4
C1orf228-201ENST00000357508 POLLQ9UGP5 575 aa30.07■■■□□ 2.4
C1orf228-201ENST00000357508 ROBO3Q96MS0 1386 aa30.07■■■□□ 2.4
C1orf228-201ENST00000357508 ZNF500O60304 480 aaPredicted RBP30.07■■■□□ 2.4
C1orf228-201ENST00000357508 PLEKHA8P1O95397 391 aa30.07■■■□□ 2.4
C1orf228-201ENST00000357508 PFKFB1P16118 471 aa30.07■■■□□ 2.4
C1orf228-201ENST00000357508 PKN1Q16512 942 aa30.07■■■□□ 2.4
C1orf228-201ENST00000357508 C11orf57Q6ZUT1 292 aaPredicted RBP30.07■■■□□ 2.4
C1orf228-201ENST00000357508 SLC16A10Q8TF71 515 aa30.07■■■□□ 2.4
C1orf228-201ENST00000357508 SDF4Q9BRK5 362 aa30.07■■■□□ 2.4
C1orf228-201ENST00000357508 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.07■■■□□ 2.4
C1orf228-201ENST00000357508 DDX60LQ5H9U9 1706 aaKnown RBP30.06■■■□□ 2.4
C1orf228-201ENST00000357508 PRPF3O43395 683 aaKnown RBP30.06■■■□□ 2.4
C1orf228-201ENST00000357508 NOL10Q9BSC4 688 aaKnown RBP30.06■■■□□ 2.4
C1orf228-201ENST00000357508 RTFDC1Q9BY42 306 aaPredicted RBP30.06■■■□□ 2.4
C1orf228-201ENST00000357508 COL11A2P13942 1736 aaPredicted RBP30.05■■■□□ 2.4
C1orf228-201ENST00000357508 ZNF202O95125 648 aa30.05■■■□□ 2.4
C1orf228-201ENST00000357508 AKAP17AQ02040 695 aaKnown RBP30.05■■■□□ 2.4
C1orf228-201ENST00000357508 SLC4A8Q2Y0W8 1093 aa30.05■■■□□ 2.4
C1orf228-201ENST00000357508 SHISA4Q96DD7 197 aa30.05■■■□□ 2.4
C1orf228-201ENST00000357508 MASTLQ96GX5 879 aa30.05■■■□□ 2.4
C1orf228-201ENST00000357508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.05■■■□□ 2.4
C1orf228-201ENST00000357508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.05■■■□□ 2.4
C1orf228-201ENST00000357508 TSPY2A6NKD2 308 aa30.05■■■□□ 2.4
C1orf228-201ENST00000357508 TOB1P50616 345 aaPredicted RBP30.05■■■□□ 2.4
C1orf228-201ENST00000357508 PPEF1O14829 653 aaPredicted RBP30.04■■■□□ 2.4
C1orf228-201ENST00000357508 IQCB1Q15051 598 aa30.04■■■□□ 2.4
C1orf228-201ENST00000357508 TMTC3Q6ZXV5 915 aa30.04■■■□□ 2.4
C1orf228-201ENST00000357508 C2CD5Q86YS7 1000 aa30.04■■■□□ 2.4
C1orf228-201ENST00000357508 NR5A1Q13285 461 aa30.04■■■□□ 2.4
C1orf228-201ENST00000357508 SHC4Q6S5L8 630 aa30.04■■■□□ 2.4
C1orf228-201ENST00000357508 TMC4Q7Z404 712 aa30.04■■■□□ 2.4
C1orf228-201ENST00000357508 ERCC4Q92889 916 aaPredicted RBP30.04■■■□□ 2.4
C1orf228-201ENST00000357508 ANO10Q9NW15 660 aa30.04■■■□□ 2.4
C1orf228-201ENST00000357508 NT5C2P49902 561 aa30.03■■■□□ 2.4
C1orf228-201ENST00000357508 HPSEQ9Y251 543 aa30.03■■■□□ 2.4
C1orf228-201ENST00000357508 ALDH1B1P30837 517 aa30.02■■■□□ 2.4
C1orf228-201ENST00000357508 RILPL1Q5EBL4 403 aa30.02■■■□□ 2.4
C1orf228-201ENST00000357508 RCSD1Q6JBY9 416 aa30.02■■■□□ 2.4
C1orf228-201ENST00000357508 MPNDQ8N594 471 aa30.02■■■□□ 2.4
C1orf228-201ENST00000357508 OXER1Q8TDS5 423 aa30.02■■■□□ 2.4
C1orf228-201ENST00000357508 TGFBRAP1Q8WUH2 860 aa30.02■■■□□ 2.4
C1orf228-201ENST00000357508 CNTNAP5Q8WYK1 1306 aa30.02■■■□□ 2.4
C1orf228-201ENST00000357508 FOCADQ5VW36 1801 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms