RNA–Protein interactions for RNA: ENST00000357197.8

PTPA-205, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 2,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-205ENST00000357197 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
PTPA-205ENST00000357197 FAM107BQ9H098 131 aa16.1■□□□□ 0.17
PTPA-205ENST00000357197 GBP3Q9H0R5 595 aa16.1■□□□□ 0.17
PTPA-205ENST00000357197 ACBD3Q9H3P7 528 aa16.1■□□□□ 0.17
PTPA-205ENST00000357197 RABEP2Q9H5N1 569 aa16.1■□□□□ 0.17
PTPA-205ENST00000357197 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
PTPA-205ENST00000357197 TAF1LQ8IZX4 1826 aa16.1■□□□□ 0.17
PTPA-205ENST00000357197 CDHR2Q9BYE9 1310 aa16.1■□□□□ 0.17
PTPA-205ENST00000357197 KIF1CO43896 1103 aaKnown RBP16.1■□□□□ 0.17
PTPA-205ENST00000357197 ABL1P00519 1130 aa16.1■□□□□ 0.17
PTPA-205ENST00000357197 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
PTPA-205ENST00000357197 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■■■■□ 24.8
PTPA-205ENST00000357197 OLFM4Q6UX06 510 aa16.1■□□□□ 0.17
PTPA-205ENST00000357197 COL23A1Q86Y22 540 aaPredicted RBP16.1■□□□□ 0.17
PTPA-205ENST00000357197 EHD4Q9H223 541 aa16.1■□□□□ 0.17
PTPA-205ENST00000357197 ZNF609O15014 1411 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 MRC1P22897 1456 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
PTPA-205ENST00000357197 CTAGE15A4D2H0 777 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 CTAGE9A4FU28 777 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 KIF28PB7ZC32 967 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 CTAGE8P0CG41 777 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 EXOSC10Q01780 885 aaKnown RBP16.09■□□□□ 0.17
PTPA-205ENST00000357197 PROSER3Q2NL68 480 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 CTAGE6Q86UF2 777 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 CTAGE4Q8IX94 777 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
PTPA-205ENST00000357197 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
PTPA-205ENST00000357197 KAT14Q9H8E8 782 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 CWF19L2Q2TBE0 894 aaKnown RBP16.09■□□□□ 0.17
PTPA-205ENST00000357197 ANO1Q5XXA6 986 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 SLC35F6Q8N357 371 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
PTPA-205ENST00000357197 TEX13AQ9BXU3 409 aaPredicted RBP16.09■□□□□ 0.17
PTPA-205ENST00000357197 RREB1Q92766 1687 aa16.08■□□□□ 0.17
PTPA-205ENST00000357197 INTS5Q6P9B9 1019 aaKnown RBP16.08■□□□□ 0.16
PTPA-205ENST00000357197 METTL16Q86W50 562 aaKnown RBP16.08■□□□□ 0.16
PTPA-205ENST00000357197 GDAP1L1Q96MZ0 367 aa16.08■□□□□ 0.16
PTPA-205ENST00000357197 HPCAL4Q9UM19 191 aa16.08■□□□□ 0.16
PTPA-205ENST00000357197 PNPLA7Q6ZV29 1317 aa16.08■□□□□ 0.16
PTPA-205ENST00000357197 ZC3H4Q9UPT8 1303 aaKnown RBP16.08■□□□□ 0.16
PTPA-205ENST00000357197 C5P01031 1676 aa16.08■□□□□ 0.16
PTPA-205ENST00000357197 SHOX2O60902 331 aaPredicted RBP16.08■□□□□ 0.16
PTPA-205ENST00000357197 CYP19A1P11511 503 aaPredicted RBP16.08■□□□□ 0.16
PTPA-205ENST00000357197 AGXT2Q9BYV1 514 aa16.08■□□□□ 0.16
PTPA-205ENST00000357197 STK32BQ9NY57 414 aa16.08■□□□□ 0.16
PTPA-205ENST00000357197 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
PTPA-205ENST00000357197 EBAG9O00559 213 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 MYO1BO43795 1136 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 FMR1Q06787 632 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTPA-205ENST00000357197 WDR93Q6P2C0 686 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 SHC4Q6S5L8 630 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 SYNE3Q6ZMZ3 975 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 KAZALD1Q96I82 304 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 C8orf76Q96K31 380 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 JPH2Q9BR39 696 aaPredicted RBP16.07■□□□□ 0.16
PTPA-205ENST00000357197 VIPAS39Q9H9C1 493 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 PCDHA5Q9Y5H7 936 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 HEG1Q9ULI3 1381 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
PTPA-205ENST00000357197 IRAK1P51617 712 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 TUBB4BP68371 445 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 NCAPH2Q6IBW4 605 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 GPHNQ9NQX3 736 aaPredicted RBP16.07■□□□□ 0.16
PTPA-205ENST00000357197 NFE2L3Q9Y4A8 694 aa16.07■□□□□ 0.16
PTPA-205ENST00000357197 NBPF26B4DH59 902 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 FOXN1O15353 648 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 ZNF18P17022 549 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 GGCXP38435 758 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 NBPF10Q6P3W6 841 aaKnown RBP16.06■□□□□ 0.16
PTPA-205ENST00000357197 TRMT44Q8IYL2 757 aaKnown RBP16.06■□□□□ 0.16
PTPA-205ENST00000357197 NBPF15Q8N660 670 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 CPLX3Q8WVH0 158 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 SUCLG2Q96I99 432 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 RAI14Q9P0K7 980 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 HPSEQ9Y251 543 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 TJP1Q07157 1748 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 AKR1B15C9JRZ8 316 aaPredicted RBP16.06■□□□□ 0.16
PTPA-205ENST00000357197 AKAP17AQ02040 695 aaKnown RBP16.06■□□□□ 0.16
PTPA-205ENST00000357197 LONRF3Q496Y0 759 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
PTPA-205ENST00000357197 MAP3K2Q9Y2U5 619 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 C4BP0C0L5 1744 aa16.06■□□□□ 0.16
PTPA-205ENST00000357197 CCDC189A1A4V9 331 aa16.05■□□□□ 0.16
PTPA-205ENST00000357197 TDO2P48775 406 aa16.05■□□□□ 0.16
PTPA-205ENST00000357197 MCMDC2Q4G0Z9 681 aa16.05■□□□□ 0.16
PTPA-205ENST00000357197 CCDC24Q8N4L8 307 aa16.05■□□□□ 0.16
PTPA-205ENST00000357197 INPP5BP32019 993 aa16.05■□□□□ 0.16
PTPA-205ENST00000357197 AIMP1Q12904 312 aaKnown RBP16.05■□□□□ 0.16
PTPA-205ENST00000357197 TUBB2AQ13885 445 aa16.05■□□□□ 0.16
PTPA-205ENST00000357197 WHAMMP3Q1A5X7 153 aa16.05■□□□□ 0.16
PTPA-205ENST00000357197 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
PTPA-205ENST00000357197 CNPY4Q8N129 248 aa16.05■□□□□ 0.16
PTPA-205ENST00000357197 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
PTPA-205ENST00000357197 ZNF274Q96GC6 653 aaPredicted RBP16.05■□□□□ 0.16
PTPA-205ENST00000357197 PANX2Q96RD6 677 aa16.05■□□□□ 0.16
PTPA-205ENST00000357197 TUBB2BQ9BVA1 445 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms