RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 GRAPLQ8TC17 118 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 TBC1D22AQ8WUA7 517 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 TMX4Q9H1E5 349 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 SEC31BQ9NQW1 1179 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 AATFQ9NY61 560 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNF38-203ENST00000353739 ZSWIM5Q9P217 1185 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 CCNL1Q9UK58 526 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 KCNH3Q9ULD8 1083 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 SRPRBQ9Y5M8 271 aaKnown RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 LRRC37AA6NMS7 1700 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 TNKSO95271 1327 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 ZSCAN12O43309 604 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 RFC4P35249 363 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 TRAPPC3LQ5T215 181 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 PI16Q6UXB8 463 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 FNBP4Q8N3X1 1017 aaPredicted RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 SPC24Q8NBT2 197 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 RPGRQ92834 1020 aaKnown RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 NAP1L4Q99733 375 aaKnown RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 KAT14Q9H8E8 782 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 SUGT1Q9Y2Z0 365 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 CACNA1SQ13698 1873 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 PSDA5PKW4 1024 aaPredicted RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 SMARCA1P28370 1054 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 MEX3CQ5U5Q3 659 aaKnown RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 DIS3L2Q8IYB7 885 aaKnown RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 HELBQ8NG08 1087 aaPredicted RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 NUP133Q8WUM0 1156 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 ANKS1AQ92625 1134 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 NGLY1Q96IV0 654 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 ABCF2Q9UG63 623 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 A0A1B0GVL5 298 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 MINDY4BA8MYZ0 360 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 KIF28PB7ZC32 967 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 SLC26A4O43511 780 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 LDHBP07195 334 aaKnown RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 SFPQP23246 707 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNF38-203ENST00000353739 ERCC5P28715 1186 aaPredicted RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 CDC27P30260 824 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 PTPAQ15257 358 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 FILIP1LQ4L180 1135 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 AXDND1Q5T1B0 1012 aaPredicted RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 C11orf57Q6ZUT1 292 aaPredicted RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 CCDC186Q7Z3E2 898 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 DGKHQ86XP1 1220 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 RIOK1Q9BRS2 568 aaKnown RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 TAF1LQ8IZX4 1826 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 FAM177BA6PVY3 158 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 GNPATO15228 680 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 PTGS1P23219 599 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 PTPREP23469 700 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 USP5P45974 858 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 SPAG1Q07617 926 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 TRIM14Q14142 442 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 POSTNQ15063 836 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 SEC23AQ15436 765 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 NT5DC1Q5TFE4 455 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 ARL6IP4Q66PJ3 421 aaKnown RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 TMTC3Q6ZXV5 915 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 NBPF11Q86T75 865 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 LRRC8AQ8IWT6 810 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 SYNE4Q8N205 404 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 DAGLBQ8NCG7 672 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 NOC3LQ8WTT2 800 aaKnown RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 PHF20Q9BVI0 1012 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 NAA15Q9BXJ9 866 aaKnown RBP4.26□□□□□ -1.73
RNF38-203ENST00000353739 CUEDC2Q9H467 287 aa4.26□□□□□ -1.73
RNF38-203ENST00000353739 RANBP6O60518 1105 aaKnown RBP4.25□□□□□ -1.73
RNF38-203ENST00000353739 SERPINC1P01008 464 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 TUBB4BP68371 445 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 TMEM132AQ24JP5 1023 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 SLFNL1Q499Z3 407 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 TBC1D9BQ66K14 1250 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 CNBD1Q8NA66 436 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 NSUN4Q96CB9 384 aaKnown RBP4.25□□□□□ -1.73
RNF38-203ENST00000353739 IQCDQ96DY2 449 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 FAM84BQ96KN1 310 aaPredicted RBP4.25□□□□□ -1.73
RNF38-203ENST00000353739 SRRTQ9BXP5 876 aaKnown RBP4.25□□□□□ -1.73
RNF38-203ENST00000353739 LRRC27Q9C0I9 530 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 CGNQ9P2M7 1197 aaKnown RBP4.25□□□□□ -1.73
RNF38-203ENST00000353739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNF38-203ENST00000353739 TCHHQ07283 1943 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 QSER1Q2KHR3 1735 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 CHGBP05060 677 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 LONP1P36776 959 aaKnown RBP4.25□□□□□ -1.73
RNF38-203ENST00000353739 PLCD1P51178 756 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 FAM98CQ17RN3 349 aaKnown RBP4.25□□□□□ -1.73
RNF38-203ENST00000353739 MIGA1Q8NAN2 632 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 CERKQ8TCT0 537 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 FBXO2Q9UK22 296 aaPredicted RBP4.25□□□□□ -1.73
RNF38-203ENST00000353739 USP21Q9UK80 565 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 SBF2Q86WG5 1849 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 A0A0G2JLW4 131 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 TSPY2A6NKD2 308 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 PPP4CP60510 307 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 MECOMQ03112 1051 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 TUBB2AQ13885 445 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 GRM4Q14833 912 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 PTPN14Q15678 1187 aa4.25□□□□□ -1.73
RNF38-203ENST00000353739 CEP135Q66GS9 1140 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms