RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MIGA2Q7L4E1 593 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 REXO1Q8N1G1 1221 aaKnown RBP15.5■□□□□ 0.07
SMC6-201ENST00000351948 DIP2AQ14689 1571 aa15.5■□□□□ 0.07
SMC6-201ENST00000351948 NFIXQ14938 502 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 ZSWIM4Q9H7M6 989 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 TTC12Q9H892 705 aaPredicted RBP15.49■□□□□ 0.07
SMC6-201ENST00000351948 CSADQ9Y600 493 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 SPATA31A1Q5TZJ5 1347 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 OVOS2A0A0J9YW53 1432 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 OVOS2Q6IE36 1432 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 ALAS1P13196 640 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 NPR1P16066 1061 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 GOPCQ9HD26 462 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 IVNS1ABPQ9Y6Y0 642 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 TMCO5BA8MYB1 307 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 DYMQ7RTS9 669 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 GPIHBP1Q8IV16 184 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 SULF1Q8IWU6 871 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 TTLL6Q8N841 843 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 TBC1D7Q9P0N9 293 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 OVOS2A0A0G2JMS6 1433 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 TAF3Q5VWG9 929 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 DPH6Q7L8W6 267 aa15.49■□□□□ 0.07
SMC6-201ENST00000351948 BTBD18B2RXH4 712 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 ZBED4O75132 1171 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 PDIA3P30101 505 aaKnown RBP15.48■□□□□ 0.07
SMC6-201ENST00000351948 SCRN1Q12765 414 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 SV2BQ7L1I2 683 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 GPHNQ9NQX3 736 aaPredicted RBP15.48■□□□□ 0.07
SMC6-201ENST00000351948 B4DLN1 442 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 KRT13P13646 458 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 PRPF4BQ13523 1007 aaKnown RBP15.48■□□□□ 0.07
SMC6-201ENST00000351948 SNX29Q8TEQ0 813 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 UBXN4Q92575 508 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 LRWD1Q9UFC0 647 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 ELP1O95163 1332 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 TMEM232C9JQI7 657 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 CAVIN2O95810 425 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 VPS72Q15906 364 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 CTNNBL1Q8WYA6 563 aaPredicted RBP15.48■□□□□ 0.07
SMC6-201ENST00000351948 DRC1Q96MC2 740 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 IFNKQ9P0W0 207 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 GSDMDP57764 484 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 ABCB5Q2M3G0 1257 aa15.48■□□□□ 0.07
SMC6-201ENST00000351948 DALRD3Q5D0E6 543 aaKnown RBP15.48■□□□□ 0.07
SMC6-201ENST00000351948 USO1O60763 962 aaKnown RBP15.47■□□□□ 0.07
SMC6-201ENST00000351948 INF2Q27J81 1249 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 INCENPQ9NQS7 918 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 ATP8A2Q9NTI2 1148 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 HS2ST1Q7LGA3 356 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 TTC16Q8NEE8 873 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 KIF18AQ8NI77 898 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 ZNF274Q96GC6 653 aaPredicted RBP15.47■□□□□ 0.07
SMC6-201ENST00000351948 MASTLQ96GX5 879 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 NRKQ7Z2Y5 1582 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 KDM4FA0A1W2PPD8 638 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 CASQ1P31415 396 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 SLC16A2P36021 539 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 PDE4DQ08499 809 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 DESP17661 470 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 CDR1P51861 262 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 DCAF17Q5H9S7 520 aaPredicted RBP15.47■□□□□ 0.07
SMC6-201ENST00000351948 SLFN13Q68D06 897 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 KCTD1Q719H9 257 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 CEP170BQ9Y4F5 1589 aaPredicted RBP15.47■□□□□ 0.07
SMC6-201ENST00000351948 CCDC169A6NNP5 214 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 SEMA3EO15041 775 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 NEBLO76041 1014 aa15.47■□□□□ 0.07
SMC6-201ENST00000351948 CA8P35219 290 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 MYSM1Q5VVJ2 828 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 CEP135Q66GS9 1140 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 GADL1Q6ZQY3 521 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 DCPSQ96C86 337 aaKnown RBP15.46■□□□□ 0.07
SMC6-201ENST00000351948 USP28Q96RU2 1077 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 BLZF1Q9H2G9 400 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 PFKFB2O60825 505 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 FLOT1O75955 427 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 CYP2E1P05181 493 aaPredicted RBP15.46■□□□□ 0.07
SMC6-201ENST00000351948 SKILP12757 684 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 CALCRLQ16602 461 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 TMEM87AQ8NBN3 555 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 ERLIN2O94905 339 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 CHRNA5P30532 468 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 KRT25Q7Z3Z0 450 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 CTNND2Q9UQB3 1225 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 MRVI1Q9Y6F6 885 aa15.46■□□□□ 0.07
SMC6-201ENST00000351948 TRAF5O00463 557 aa15.46■□□□□ 0.06
SMC6-201ENST00000351948 ZNF202O95125 648 aa15.46■□□□□ 0.06
SMC6-201ENST00000351948 UBXN1Q04323 297 aa15.46■□□□□ 0.06
SMC6-201ENST00000351948 UVSSAQ2YD98 709 aa15.46■□□□□ 0.06
SMC6-201ENST00000351948 RASGRP4Q8TDF6 673 aa15.46■□□□□ 0.06
SMC6-201ENST00000351948 HOOK2Q96ED9 719 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
SMC6-201ENST00000351948 PREX1Q8TCU6 1659 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 MED23Q9ULK4 1368 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 USP17L3A6NCW0 530 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 USP17L4A6NCW7 530 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 FAM196BA6NMK8 535 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms