RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 ZNF444Q8N0Y2 327 aaPredicted RBP11.41□□□□□ -0.58
CLDN18-202ENST00000343735 EHD4Q9H223 541 aa11.41□□□□□ -0.58
CLDN18-202ENST00000343735 TDRD3Q9H7E2 651 aaKnown RBP11.41□□□□□ -0.58
CLDN18-202ENST00000343735 SMC3Q9UQE7 1217 aa11.41□□□□□ -0.58
CLDN18-202ENST00000343735 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
CLDN18-202ENST00000343735 PPP4R3BQ5MIZ7 849 aa11.41□□□□□ -0.58
CLDN18-202ENST00000343735 FOXP4Q8IVH2 680 aaPredicted RBP11.41□□□□□ -0.58
CLDN18-202ENST00000343735 CCDC82Q8N4S0 544 aa11.41□□□□□ -0.58
CLDN18-202ENST00000343735 UBAC1Q9BSL1 405 aa11.41□□□□□ -0.58
CLDN18-202ENST00000343735 TRIM34Q9BYJ4 488 aa11.41□□□□□ -0.58
CLDN18-202ENST00000343735 AGXT2Q9BYV1 514 aa11.41□□□□□ -0.58
CLDN18-202ENST00000343735 ZNF70Q9UC06 446 aaPredicted RBP11.41□□□□□ -0.58
CLDN18-202ENST00000343735 B4E1Z4 1266 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 RXRAP19793 462 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 RRP12Q5JTH9 1297 aaKnown RBP11.4□□□□□ -0.58
CLDN18-202ENST00000343735 FAM83AQ86UY5 434 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 MICALL2Q8IY33 904 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 ZBED3Q96IU2 234 aaPredicted RBP11.4□□□□□ -0.58
CLDN18-202ENST00000343735 PI4KBQ9UBF8 816 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 SAP30BPQ9UHR5 308 aaKnown RBP11.4□□□□□ -0.58
CLDN18-202ENST00000343735 R3HCC1Q9Y3T6 440 aaKnown RBP11.4□□□□□ -0.58
CLDN18-202ENST00000343735 NAV1Q8NEY1 1877 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 C16orf86Q6ZW13 317 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 CCDC144CPQ8IYA2 1237 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 ERCC4Q92889 916 aaPredicted RBP11.4□□□□□ -0.58
CLDN18-202ENST00000343735 INTS4Q96HW7 963 aaKnown RBP11.4□□□□□ -0.58
CLDN18-202ENST00000343735 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLDN18-202ENST00000343735 ZNF541Q9H0D2 1346 aa11.4□□□□□ -0.58
CLDN18-202ENST00000343735 SYNE3Q6ZMZ3 975 aa11.4□□□□□ -0.59
CLDN18-202ENST00000343735 ZSCAN29Q8IWY8 852 aaPredicted RBP11.4□□□□□ -0.59
CLDN18-202ENST00000343735 FAM151AQ8WW52 585 aa11.4□□□□□ -0.59
CLDN18-202ENST00000343735 CWC22Q9HCG8 908 aaKnown RBP11.4□□□□□ -0.59
CLDN18-202ENST00000343735 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.59
CLDN18-202ENST00000343735 ZSWIM5Q9P217 1185 aa11.4□□□□□ -0.59
CLDN18-202ENST00000343735 SERPINB13Q9UIV8 391 aa11.4□□□□□ -0.59
CLDN18-202ENST00000343735 ANGEL1Q9UNK9 670 aaKnown RBP11.4□□□□□ -0.59
CLDN18-202ENST00000343735 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.4□□□□□ -0.59
CLDN18-202ENST00000343735 NEDD4P46934 1319 aa11.39□□□□□ -0.59
CLDN18-202ENST00000343735 RANBP6O60518 1105 aaKnown RBP11.39□□□□□ -0.59
CLDN18-202ENST00000343735 LIFRP42702 1097 aa11.39□□□□□ -0.59
CLDN18-202ENST00000343735 NASPP49321 788 aaPredicted RBP11.39□□□□□ -0.59
CLDN18-202ENST00000343735 ANP32BQ92688 251 aaKnown RBP11.39□□□□□ -0.59
CLDN18-202ENST00000343735 ZNF274Q96GC6 653 aaPredicted RBP11.39□□□□□ -0.59
CLDN18-202ENST00000343735 GPRC5DQ9NZD1 345 aa11.39□□□□□ -0.59
CLDN18-202ENST00000343735 LAMB1P07942 1786 aa11.39□□□□□ -0.59
CLDN18-202ENST00000343735 IFIT3O14879 490 aaKnown RBP11.39□□□□□ -0.59
CLDN18-202ENST00000343735 FOCADQ5VW36 1801 aa11.39□□□□□ -0.59
CLDN18-202ENST00000343735 CYP2D7A0A087X1C5 515 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 TSPY2A6NKD2 308 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 WNT10BO00744 389 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 DHX16O60231 1041 aaKnown RBP11.38□□□□□ -0.59
CLDN18-202ENST00000343735 EVCP57679 992 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 TOB2Q14106 344 aaPredicted RBP11.38□□□□□ -0.59
CLDN18-202ENST00000343735 TMEM67Q5HYA8 995 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 OTUD7BQ6GQQ9 843 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 CRACR2BQ8N4Y2 399 aaPredicted RBP11.38□□□□□ -0.59
CLDN18-202ENST00000343735 BRF1Q92994 677 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 HOOK2Q96ED9 719 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 DDX4Q9NQI0 724 aaKnown RBP11.38□□□□□ -0.59
CLDN18-202ENST00000343735 PRDM4Q9UKN5 801 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 ATRNL1Q5VV63 1379 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 CYP2D6P10635 497 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 CDK8P49336 464 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 PLCD1P51178 756 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 CUL4AQ13619 759 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 KIF4BQ2VIQ3 1234 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 GPT2Q8TD30 523 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 CCDC17Q96LX7 622 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 NCOA5Q9HCD5 579 aaKnown RBP11.38□□□□□ -0.59
CLDN18-202ENST00000343735 TCP11L1Q9NUJ3 509 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 FAM198AQ9UFP1 575 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 CCDC69A6NI79 296 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 RCAN1P53805 252 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 DNM1Q05193 864 aaKnown RBP11.38□□□□□ -0.59
CLDN18-202ENST00000343735 WTAPQ15007 396 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 NFXL1Q6ZNB6 911 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 TMEM63CQ9P1W3 806 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 HERC5Q9UII4 1024 aaKnown RBP11.38□□□□□ -0.59
CLDN18-202ENST00000343735 SBF1O95248 1867 aa11.38□□□□□ -0.59
CLDN18-202ENST00000343735 ECM29Q5VYK3 1845 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 SH2B2O14492 632 aaPredicted RBP11.37□□□□□ -0.59
CLDN18-202ENST00000343735 JAK2O60674 1132 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 NFIAQ12857 509 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 APOBEC3FQ8IUX4 373 aaKnown RBP11.37□□□□□ -0.59
CLDN18-202ENST00000343735 ZSCAN10Q96SZ4 725 aaPredicted RBP11.37□□□□□ -0.59
CLDN18-202ENST00000343735 PDCL3Q9H2J4 239 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 VEZTQ9HBM0 779 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
CLDN18-202ENST00000343735 GJB2P29033 226 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 ANTXR2P58335 489 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 TCP10Q12799 353 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 CYB5R4Q7L1T6 521 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 SGMS1Q86VZ5 419 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 PIBF1Q8WXW3 757 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 ADARB2Q9NS39 739 aaKnown RBP11.37□□□□□ -0.59
CLDN18-202ENST00000343735 GABPAQ06546 454 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms