RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 GJB1P08034 283 aa23.64■■□□□ 1.37
ITGA4-202ENST00000339307 IFIT2P09913 472 aaKnown RBP23.64■■□□□ 1.37
ITGA4-202ENST00000339307 SH3D19Q5HYK7 790 aa23.64■■□□□ 1.37
ITGA4-202ENST00000339307 DPF3Q92784 378 aa23.64■■□□□ 1.37
ITGA4-202ENST00000339307 WDR18Q9BV38 432 aa23.64■■□□□ 1.37
ITGA4-202ENST00000339307 UNC93B1Q9H1C4 597 aa23.64■■□□□ 1.37
ITGA4-202ENST00000339307 DDX19BQ9UMR2 479 aa23.64■■□□□ 1.37
ITGA4-202ENST00000339307 CDK5RAP2Q96SN8 1893 aa23.64■■□□□ 1.37
ITGA4-202ENST00000339307 USP17L10C9JJH3 530 aa23.63■■□□□ 1.37
ITGA4-202ENST00000339307 GJA8P48165 433 aa23.63■■□□□ 1.37
ITGA4-202ENST00000339307 CERS3Q8IU89 383 aa23.63■■□□□ 1.37
ITGA4-202ENST00000339307 RPAP2Q8IXW5 612 aaPredicted RBP23.63■■□□□ 1.37
ITGA4-202ENST00000339307 SHISA4Q96DD7 197 aa23.63■■□□□ 1.37
ITGA4-202ENST00000339307 DNAJC2Q99543 621 aaKnown RBP23.63■■□□□ 1.37
ITGA4-202ENST00000339307 ZBTB21Q9ULJ3 1066 aa23.63■■□□□ 1.37
ITGA4-202ENST00000339307 SIPA1L1O43166 1804 aa23.62■■□□□ 1.37
ITGA4-202ENST00000339307 INHAP05111 366 aa23.62■■□□□ 1.37
ITGA4-202ENST00000339307 TTF1Q15361 905 aaPredicted RBP23.62■■□□□ 1.37
ITGA4-202ENST00000339307 KIF1BPQ96EK5 621 aa23.62■■□□□ 1.37
ITGA4-202ENST00000339307 LOC285556D6RIA3 1793 aa23.61■■□□□ 1.37
ITGA4-202ENST00000339307 C19orf81C9J6K1 198 aa23.61■■□□□ 1.37
ITGA4-202ENST00000339307 METTL16Q86W50 562 aaKnown RBP23.61■■□□□ 1.37
ITGA4-202ENST00000339307 PXYLP1Q8TE99 480 aa23.61■■□□□ 1.37
ITGA4-202ENST00000339307 U2AF1L4Q8WU68 220 aaKnown RBP23.61■■□□□ 1.37
ITGA4-202ENST00000339307 FOCADQ5VW36 1801 aa23.61■■□□□ 1.37
ITGA4-202ENST00000339307 MAGEB6P1A0A0J9YX57 407 aa23.6■■□□□ 1.37
ITGA4-202ENST00000339307 GH2P01242 217 aa23.6■■□□□ 1.37
ITGA4-202ENST00000339307 IRF5Q13568 498 aa23.6■■□□□ 1.37
ITGA4-202ENST00000339307 ZYXQ15942 572 aaKnown RBP23.6■■□□□ 1.37
ITGA4-202ENST00000339307 HABP4Q5JVS0 413 aaKnown RBP23.6■■□□□ 1.37
ITGA4-202ENST00000339307 TTC6Q86TZ1 520 aa23.6■■□□□ 1.37
ITGA4-202ENST00000339307 FEZ1Q99689 392 aa23.6■■□□□ 1.37
ITGA4-202ENST00000339307 GINM1Q9NU53 330 aa23.6■■□□□ 1.37
ITGA4-202ENST00000339307 GOLIM4O00461 696 aa23.59■■□□□ 1.37
ITGA4-202ENST00000339307 TFRCP02786 760 aaKnown RBP23.59■■□□□ 1.37
ITGA4-202ENST00000339307 POLR3DP05423 398 aaPredicted RBP23.59■■□□□ 1.37
ITGA4-202ENST00000339307 RAB3GAP1Q15042 981 aa23.59■■□□□ 1.37
ITGA4-202ENST00000339307 SLC9C2Q5TAH2 1124 aa23.59■■□□□ 1.37
ITGA4-202ENST00000339307 CCAR1Q8IX12 1150 aaKnown RBP23.59■■□□□ 1.37
ITGA4-202ENST00000339307 P2RX7Q99572 595 aaKnown RBP23.59■■□□□ 1.37
ITGA4-202ENST00000339307 SERPINB13Q9UIV8 391 aa23.59■■□□□ 1.37
ITGA4-202ENST00000339307 RCAN3Q9UKA8 241 aa23.59■■□□□ 1.37
ITGA4-202ENST00000339307 MYH1P12882 1939 aa23.59■■□□□ 1.37
ITGA4-202ENST00000339307 CHMP4BQ9H444 224 aaKnown RBP23.59■■□□□ 1.37
ITGA4-202ENST00000339307 H0YGN5 161 aa23.58■■□□□ 1.36
ITGA4-202ENST00000339307 PEX10O60683 326 aa23.58■■□□□ 1.36
ITGA4-202ENST00000339307 SGPL1O95470 568 aa23.58■■□□□ 1.36
ITGA4-202ENST00000339307 CERKLQ49MI3 558 aaPredicted RBP23.58■■□□□ 1.36
ITGA4-202ENST00000339307 DEFB118Q96PH6 123 aa23.58■■□□□ 1.36
ITGA4-202ENST00000339307 ZBTB40Q9NUA8 1239 aa23.58■■□□□ 1.36
ITGA4-202ENST00000339307 RAB11FIP3O75154 756 aa23.57■■□□□ 1.36
ITGA4-202ENST00000339307 HOXA7P31268 230 aaPredicted RBP23.57■■□□□ 1.36
ITGA4-202ENST00000339307 HERVK_113P62684 666 aa23.57■■□□□ 1.36
ITGA4-202ENST00000339307 TMED8Q6PL24 325 aaPredicted RBP23.57■■□□□ 1.36
ITGA4-202ENST00000339307 USP17L2Q6R6M4 530 aa23.57■■□□□ 1.36
ITGA4-202ENST00000339307 SIRT2Q8IXJ6 389 aa23.57■■□□□ 1.36
ITGA4-202ENST00000339307 GPRC5AQ8NFJ5 357 aa23.57■■□□□ 1.36
ITGA4-202ENST00000339307 PAGR1Q9BTK6 254 aa23.57■■□□□ 1.36
ITGA4-202ENST00000339307 HTATIP2Q9BUP3 242 aa23.57■■□□□ 1.36
ITGA4-202ENST00000339307 CRNKL1Q9BZJ0 848 aaKnown RBP23.57■■□□□ 1.36
ITGA4-202ENST00000339307 CABP5Q9NP86 173 aa23.57■■□□□ 1.36
ITGA4-202ENST00000339307 FARP2O94887 1054 aaPredicted RBP23.56■■□□□ 1.36
ITGA4-202ENST00000339307 PDE6AP16499 860 aa23.56■■□□□ 1.36
ITGA4-202ENST00000339307 ABCB5Q2M3G0 1257 aa23.56■■□□□ 1.36
ITGA4-202ENST00000339307 CWC22Q9HCG8 908 aaKnown RBP23.56■■□□□ 1.36
ITGA4-202ENST00000339307 EMILIN3Q9NT22 766 aa23.56■■□□□ 1.36
ITGA4-202ENST00000339307 ZNF532Q9HCE3 1301 aa23.56■■□□□ 1.36
ITGA4-202ENST00000339307 PLCD1P51178 756 aa23.55■■□□□ 1.36
ITGA4-202ENST00000339307 TATDN1Q6P1N9 297 aa23.55■■□□□ 1.36
ITGA4-202ENST00000339307 RIOK1Q9BRS2 568 aaKnown RBP23.55■■□□□ 1.36
ITGA4-202ENST00000339307 EHD4Q9H223 541 aa23.55■■□□□ 1.36
ITGA4-202ENST00000339307 BOLA2Q9H3K6 86 aa23.55■■□□□ 1.36
ITGA4-202ENST00000339307 MCM9Q9NXL9 1143 aa23.55■■□□□ 1.36
ITGA4-202ENST00000339307 MORF4L1Q9UBU8 362 aa23.55■■□□□ 1.36
ITGA4-202ENST00000339307 COLQQ9Y215 455 aaPredicted RBP23.55■■□□□ 1.36
ITGA4-202ENST00000339307 DOCK3Q8IZD9 2030 aa23.54■■□□□ 1.36
ITGA4-202ENST00000339307 CYP2B6P20813 491 aa23.54■■□□□ 1.36
ITGA4-202ENST00000339307 EDC3Q96F86 508 aaKnown RBP23.54■■□□□ 1.36
ITGA4-202ENST00000339307 TXNRD2Q9NNW7 524 aa23.54■■□□□ 1.36
ITGA4-202ENST00000339307 MPHOSPH10O00566 681 aaKnown RBP23.53■■□□□ 1.36
ITGA4-202ENST00000339307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.53■■□□□ 1.36
ITGA4-202ENST00000339307 HMGCRP04035 888 aa23.52■■□□□ 1.36
ITGA4-202ENST00000339307 PDE3AQ14432 1141 aa23.52■■□□□ 1.36
ITGA4-202ENST00000339307 SDR42E1Q8WUS8 393 aa23.52■■□□□ 1.36
ITGA4-202ENST00000339307 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.52■■□□□ 1.36
ITGA4-202ENST00000339307 PAG1Q9NWQ8 432 aa23.52■■□□□ 1.36
ITGA4-202ENST00000339307 GJD2Q9UKL4 321 aa23.52■■□□□ 1.36
ITGA4-202ENST00000339307 USP14P54578 494 aa23.51■■□□□ 1.35
ITGA4-202ENST00000339307 LCORLQ8N3X6 602 aa23.51■■□□□ 1.35
ITGA4-202ENST00000339307 NUDT12Q9BQG2 462 aa23.51■■□□□ 1.35
ITGA4-202ENST00000339307 RBPJLQ9UBG7 517 aa23.51■■□□□ 1.35
ITGA4-202ENST00000339307 ERVK-9P63128 1117 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 ERVK-24P63145 666 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 TRIM32Q13049 653 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 Q3C1V9 767 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 ARMT1Q9H993 441 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 USP17L15C9J2P7 530 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 USP17L13C9JLJ4 530 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 USP17L11C9JVI0 530 aa23.5■■□□□ 1.35
ITGA4-202ENST00000339307 USP17L18D6R9N7 530 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms