RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 MCM3P25205 808 aa3.62□□□□□ -1.83
SOCS4-201ENST00000339298 DNAJC21Q5F1R6 531 aaKnown RBP3.62□□□□□ -1.83
SOCS4-201ENST00000339298 SPECC1LQ69YQ0 1117 aa3.62□□□□□ -1.83
SOCS4-201ENST00000339298 YME1L1Q96TA2 773 aa3.62□□□□□ -1.83
SOCS4-201ENST00000339298 PALMDQ9NP74 551 aa3.62□□□□□ -1.83
SOCS4-201ENST00000339298 GPHNQ9NQX3 736 aaPredicted RBP3.62□□□□□ -1.83
SOCS4-201ENST00000339298 POLIQ9UNA4 740 aa3.62□□□□□ -1.83
SOCS4-201ENST00000339298 DMTF1Q9Y222 760 aa3.62□□□□□ -1.83
SOCS4-201ENST00000339298 RRP15Q9Y3B9 282 aaKnown RBP3.62□□□□□ -1.83
SOCS4-201ENST00000339298 SMARCA2P51531 1590 aa3.62□□□□□ -1.83
SOCS4-201ENST00000339298 A0A0G2JS52 829 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ACTN1P12814 892 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 PTPREP23469 700 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 KIF5BP33176 963 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 EIF6P56537 245 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 GOLGA8DPQ0D2H9 430 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 TSTA3Q13630 321 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 KRT33BQ14525 404 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ACAP1Q15027 740 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 TAF7Q15545 349 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 KIAA0753Q2KHM9 967 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ABCB5Q2M3G0 1257 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 GDF6Q6KF10 455 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 CRELD2Q6UXH1 353 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 APLFQ8IW19 511 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 REM2Q8IYK8 340 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 GPRASP2Q96D09 838 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 LRRC46Q96FV0 321 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 CLMNQ96JQ2 1002 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 SH3GL2Q99962 352 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 STARD7Q9NQZ5 370 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 AATFQ9NY61 560 aaKnown RBP eCLIP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 FLT3P36888 993 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 HNRNPUQ00839 825 aaKnown RBP eCLIP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ASPHQ12797 758 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 TRDNQ13061 729 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 MAP7Q14244 749 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 GNASQ5JWF2 1037 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 NANOGNBQ7Z5D8 188 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 SLF2Q8IX21 1173 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 MIER2Q8N344 545 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 SH3TC2Q8TF17 1288 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 STAG1Q8WVM7 1258 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 N4BP2L2Q92802 583 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 NKD1Q969G9 470 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 FERMT2Q96AC1 680 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 EVI5LQ96CN4 794 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 TSNARE1Q96NA8 513 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ARHGEF10LQ9HCE6 1279 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ZNF277Q9NRM2 450 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 TBC1D23Q9NUY8 699 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 CENPJQ9HC77 1338 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 WASHC2CQ9Y4E1 1318 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 TSPAN9O75954 239 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 GBP1P32455 592 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 PSMC1P62191 440 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 HDLBPQ00341 1268 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 STARD3Q14849 445 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ZNF574Q6ZN55 896 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 TTC30AQ86WT1 665 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 PGBD3Q8N328 593 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 TAB3Q8N5C8 712 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ZDHHC16Q969W1 377 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 SP110Q9HB58 689 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 LUC7LQ9NQ29 371 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 MAP3K20Q9NYL2 800 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ACTR10Q9NZ32 417 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 CDC14CA4D256 554 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 HNRNPCL2B2RXH8 293 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 RASSF9O75901 435 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 MYZAPP0CAP1 466 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 NUP62P37198 522 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 TMEM266Q2M3C6 531 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 KLHL10Q6JEL2 608 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 PI16Q6UXB8 463 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ZC3H7AQ8IWR0 971 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 SLC4A11Q8NBS3 891 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 OPTNQ96CV9 577 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 NAP1L3Q99457 506 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ZCWPW1Q9H0M4 648 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 CCDC8Q9H0W5 538 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 EIF2B3Q9NR50 452 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 CREBZFQ9NS37 354 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 CATSPERZQ9NTU4 200 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 RHBDL2Q9NX52 303 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 SUFUQ9UMX1 484 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 PRELID1Q9Y255 219 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 SNX5Q9Y5X3 404 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 ESYT3A0FGR9 886 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 DDX3YO15523 660 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 BUB1BO60566 1050 aaPredicted RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 FLOT1O75955 427 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 PARNO95453 639 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 P4HBP07237 508 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 EIF2AK2P19525 551 aaKnown RBP3.61□□□□□ -1.83
SOCS4-201ENST00000339298 LETM2Q2VYF4 491 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 HAUS3Q68CZ6 603 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 PHLDB2Q86SQ0 1253 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 RNF217Q8TC41 542 aa3.61□□□□□ -1.83
SOCS4-201ENST00000339298 RUFY2Q8WXA3 655 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms