RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 A0A1W2PQ64 194 aa26.7■■□□□ 1.86
CLPTM1-201ENST00000337392 A0A1W2PQD8 194 aa26.7■■□□□ 1.86
CLPTM1-201ENST00000337392 ARID5BQ14865 1188 aa26.7■■□□□ 1.86
CLPTM1-201ENST00000337392 PROM2Q8N271 834 aa26.7■■□□□ 1.86
CLPTM1-201ENST00000337392 CABP5Q9NP86 173 aa26.7■■□□□ 1.86
CLPTM1-201ENST00000337392 PKN1Q16512 942 aa26.69■■□□□ 1.86
CLPTM1-201ENST00000337392 CCDC186Q7Z3E2 898 aa26.69■■□□□ 1.86
CLPTM1-201ENST00000337392 TROAPQ12815 778 aa26.69■■□□□ 1.86
CLPTM1-201ENST00000337392 LDHBP07195 334 aaKnown RBP26.69■■□□□ 1.86
CLPTM1-201ENST00000337392 ZNF75DP51815 510 aa26.69■■□□□ 1.86
CLPTM1-201ENST00000337392 PNOCQ13519 176 aa26.69■■□□□ 1.86
CLPTM1-201ENST00000337392 CCDC144BQ3MJ40 725 aa26.69■■□□□ 1.86
CLPTM1-201ENST00000337392 CERKQ8TCT0 537 aa26.69■■□□□ 1.86
CLPTM1-201ENST00000337392 TGFBRAP1Q8WUH2 860 aa26.69■■□□□ 1.86
CLPTM1-201ENST00000337392 USP49Q70CQ1 688 aa26.68■■□□□ 1.86
CLPTM1-201ENST00000337392 MAPKAPK5Q8IW41 473 aa26.68■■□□□ 1.86
CLPTM1-201ENST00000337392 KIAA1468Q9P260 1216 aa26.68■■□□□ 1.86
CLPTM1-201ENST00000337392 SEMA3EO15041 775 aa26.68■■□□□ 1.86
CLPTM1-201ENST00000337392 KIAA2012Q0VF49 1180 aa26.68■■□□□ 1.86
CLPTM1-201ENST00000337392 IQCA1Q86XH1 822 aa26.68■■□□□ 1.86
CLPTM1-201ENST00000337392 TSPY2A6NKD2 308 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 ONECUT3O60422 494 aaPredicted RBP26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 DEXIO95424 95 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 USP5P45974 858 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 FUT2Q10981 343 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 USP17L3A6NCW0 530 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 USP17L4A6NCW7 530 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 BECN2A8MW95 431 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 GOLGA6L19H0YKK7 550 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 PLCD1P51178 756 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 USP17L1Q7RTZ2 530 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 PDILTQ8N807 584 aa26.67■■□□□ 1.86
CLPTM1-201ENST00000337392 STK36Q9NRP7 1315 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 CMA1P23946 247 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 SYKP43405 635 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 LONRF3Q496Y0 759 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 CATIPQ7Z7H3 387 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 SRBD1Q8N5C6 995 aaKnown RBP26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 POLLQ9UGP5 575 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 XDHP47989 1333 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 CTAGE5O15320 804 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 PTPN21Q16825 1174 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 PLA2G4DQ86XP0 818 aa26.66■■□□□ 1.86
CLPTM1-201ENST00000337392 RIMBP2O15034 1052 aa26.65■■□□□ 1.86
CLPTM1-201ENST00000337392 SLC3A2P08195 630 aaKnown RBP26.65■■□□□ 1.86
CLPTM1-201ENST00000337392 GRAMD1CQ8IYS0 662 aa26.65■■□□□ 1.86
CLPTM1-201ENST00000337392 MYH6P13533 1939 aa26.65■■□□□ 1.86
CLPTM1-201ENST00000337392 TMTC2Q8N394 836 aa26.65■■□□□ 1.86
CLPTM1-201ENST00000337392 SAFBQ15424 915 aaKnown RBP eCLIP26.64■■□□□ 1.85
CLPTM1-201ENST00000337392 CPVLQ9H3G5 476 aa26.64■■□□□ 1.85
CLPTM1-201ENST00000337392 TFAP4Q01664 338 aa26.63■■□□□ 1.85
CLPTM1-201ENST00000337392 RCSD1Q6JBY9 416 aa26.63■■□□□ 1.85
CLPTM1-201ENST00000337392 IL17RBQ9NRM6 502 aa26.63■■□□□ 1.85
CLPTM1-201ENST00000337392 ANO10Q9NW15 660 aa26.63■■□□□ 1.85
CLPTM1-201ENST00000337392 CLIP2Q9UDT6 1046 aa26.63■■□□□ 1.85
CLPTM1-201ENST00000337392 F8W031 263 aaPredicted RBP26.63■■□□□ 1.85
CLPTM1-201ENST00000337392 DNTTIP2Q5QJE6 756 aaKnown RBP26.63■■□□□ 1.85
CLPTM1-201ENST00000337392 MXD3Q9BW11 206 aa26.63■■□□□ 1.85
CLPTM1-201ENST00000337392 CD209Q9NNX6 404 aa26.63■■□□□ 1.85
CLPTM1-201ENST00000337392 CCDC196A0A1B0GTZ2 297 aa26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 C6orf229H3BNL8 230 aa26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 AKAP17AQ02040 695 aaKnown RBP26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 NOLC1Q14978 699 aaKnown RBP eCLIP26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 HSP90AA4PQ58FG1 418 aa26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 FOXP4Q8IVH2 680 aaPredicted RBP26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 STAG2Q8N3U4 1231 aa26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 NID2Q14112 1375 aa26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 RGL2O15211 777 aa26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 FGRP09769 529 aa26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 KRT27Q7Z3Y8 459 aa26.62■■□□□ 1.85
CLPTM1-201ENST00000337392 UBR3Q6ZT12 1888 aa26.61■■□□□ 1.85
CLPTM1-201ENST00000337392 ATP8A2Q9NTI2 1148 aa26.61■■□□□ 1.85
CLPTM1-201ENST00000337392 HPSEQ9Y251 543 aa26.61■■□□□ 1.85
CLPTM1-201ENST00000337392 ZNF827Q17R98 1081 aa26.61■■□□□ 1.85
CLPTM1-201ENST00000337392 METTL16Q86W50 562 aaKnown RBP26.61■■□□□ 1.85
CLPTM1-201ENST00000337392 WASF1Q92558 559 aa26.61■■□□□ 1.85
CLPTM1-201ENST00000337392 MKRN1Q9UHC7 482 aaKnown RBP26.61■■□□□ 1.85
CLPTM1-201ENST00000337392 LEMD3Q9Y2U8 911 aa26.61■■□□□ 1.85
CLPTM1-201ENST00000337392 ST5P78524 1137 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 RESP18Q5W5W9 173 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 ZNF804AQ7Z570 1209 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 CEP57L1Q8IYX8 460 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 CCDC88AQ3V6T2 1871 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 PPP6R2O75170 966 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 TXNRD1Q16881 649 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 CRY2Q49AN0 593 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 MSL1Q68DK7 614 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 FILIP1Q7Z7B0 1213 aa26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 GPKOWQ92917 476 aaPredicted RBP eCLIP26.6■■□□□ 1.85
CLPTM1-201ENST00000337392 POLRMTO00411 1230 aaKnown RBP26.59■■□□□ 1.85
CLPTM1-201ENST00000337392 SLURP2P0DP57 97 aa26.59■■□□□ 1.85
CLPTM1-201ENST00000337392 RNF26Q9BY78 433 aaPredicted RBP26.59■■□□□ 1.85
CLPTM1-201ENST00000337392 KCNH3Q9ULD8 1083 aa26.59■■□□□ 1.85
CLPTM1-201ENST00000337392 BTDP43251 543 aa26.59■■□□□ 1.85
CLPTM1-201ENST00000337392 TMTC3Q6ZXV5 915 aa26.59■■□□□ 1.85
CLPTM1-201ENST00000337392 ARPP21Q9UBL0 812 aaPredicted RBP26.59■■□□□ 1.85
CLPTM1-201ENST00000337392 GGA1Q9UJY5 639 aa26.59■■□□□ 1.85
CLPTM1-201ENST00000337392 CNTNAP5Q8WYK1 1306 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms