RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
LIPA-202ENST00000336233 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
LIPA-202ENST00000336233 MINPP1Q9UNW1 487 aa16.37■□□□□ 0.21
LIPA-202ENST00000336233 SRPRBQ9Y5M8 271 aaKnown RBP16.37■□□□□ 0.21
LIPA-202ENST00000336233 PSDA5PKW4 1024 aaPredicted RBP16.36■□□□□ 0.21
LIPA-202ENST00000336233 FOXP4Q8IVH2 680 aaPredicted RBP16.36■□□□□ 0.21
LIPA-202ENST00000336233 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
LIPA-202ENST00000336233 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
LIPA-202ENST00000336233 ZSCAN10Q96SZ4 725 aaPredicted RBP16.36■□□□□ 0.21
LIPA-202ENST00000336233 RBM28Q9NW13 759 aaKnown RBP16.36■□□□□ 0.21
LIPA-202ENST00000336233 TAF1P21675 1872 aa16.36■□□□□ 0.21
LIPA-202ENST00000336233 FBXO33Q7Z6M2 555 aa16.36■□□□□ 0.21
LIPA-202ENST00000336233 PLCD3Q8N3E9 789 aa16.36■□□□□ 0.21
LIPA-202ENST00000336233 ENAHQ8N8S7 591 aaPredicted RBP16.36■□□□□ 0.21
LIPA-202ENST00000336233 FAM84BQ96KN1 310 aaPredicted RBP16.36■□□□□ 0.21
LIPA-202ENST00000336233 ABCF2Q9UG63 623 aa16.36■□□□□ 0.21
LIPA-202ENST00000336233 PCDHA5Q9Y5H7 936 aa16.36■□□□□ 0.21
LIPA-202ENST00000336233 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
LIPA-202ENST00000336233 SFPQP23246 707 aaKnown RBP eCLIP16.35■□□□□ 0.21
LIPA-202ENST00000336233 LMOD1P29536 600 aaPredicted RBP16.35■□□□□ 0.21
LIPA-202ENST00000336233 BAZ2AQ9UIF9 1905 aaKnown RBP16.35■□□□□ 0.21
LIPA-202ENST00000336233 MYH2Q9UKX2 1941 aa16.35■□□□□ 0.21
LIPA-202ENST00000336233 A0A0G2JS52 829 aa16.35■□□□□ 0.21
LIPA-202ENST00000336233 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
LIPA-202ENST00000336233 CALM1P0DP23 149 aa16.35■□□□□ 0.21
LIPA-202ENST00000336233 CALM2P0DP24 149 aa16.35■□□□□ 0.21
LIPA-202ENST00000336233 CALM3P0DP25 149 aa16.35■□□□□ 0.21
LIPA-202ENST00000336233 SARSP49591 514 aaKnown RBP16.35■□□□□ 0.21
LIPA-202ENST00000336233 TRIML1Q8N9V2 468 aa16.35■□□□□ 0.21
LIPA-202ENST00000336233 ZNF384Q8TF68 577 aa16.35■□□□□ 0.21
LIPA-202ENST00000336233 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
LIPA-202ENST00000336233 DDAH1O94760 285 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 XBP1P17861 261 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 NCBP1Q09161 790 aaKnown RBP16.34■□□□□ 0.21
LIPA-202ENST00000336233 POSTNQ15063 836 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 PKN1Q16512 942 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 NUP133Q8WUM0 1156 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
LIPA-202ENST00000336233 PCDHB6Q9Y5E3 794 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 NRDCO43847 1150 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 ORC4O43929 436 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 TUBB4AP04350 444 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 NR5A1Q13285 461 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 KANK3Q6NY19 840 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 SHISA4Q96DD7 197 aa16.34■□□□□ 0.21
LIPA-202ENST00000336233 ATP1A3P13637 1013 aa16.33■□□□□ 0.21
LIPA-202ENST00000336233 BMP6P22004 513 aa16.33■□□□□ 0.21
LIPA-202ENST00000336233 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.21
LIPA-202ENST00000336233 CATIPQ7Z7H3 387 aa16.33■□□□□ 0.21
LIPA-202ENST00000336233 OXER1Q8TDS5 423 aa16.33■□□□□ 0.21
LIPA-202ENST00000336233 MAN1B1Q9UKM7 699 aa16.33■□□□□ 0.21
LIPA-202ENST00000336233 KCNQ2O43526 872 aa16.33■□□□□ 0.2
LIPA-202ENST00000336233 ACTN4O43707 911 aaKnown RBP16.33■□□□□ 0.2
LIPA-202ENST00000336233 DYNLL1P63167 89 aaKnown RBP16.33■□□□□ 0.2
LIPA-202ENST00000336233 ISM2Q6H9L7 571 aa16.33■□□□□ 0.2
LIPA-202ENST00000336233 VSTM4Q8IW00 320 aa16.33■□□□□ 0.2
LIPA-202ENST00000336233 MLKLQ8NB16 471 aa16.33■□□□□ 0.2
LIPA-202ENST00000336233 SPATA20Q8TB22 786 aa16.33■□□□□ 0.2
LIPA-202ENST00000336233 AATFQ9NY61 560 aaKnown RBP eCLIP16.33■□□□□ 0.2
LIPA-202ENST00000336233 DACH1Q9UI36 760 aa16.33■□□□□ 0.2
LIPA-202ENST00000336233 BMP15O95972 392 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 UBASH3AP57075 661 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
LIPA-202ENST00000336233 GRIN1Q05586 938 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 MORC3Q14149 939 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 CTR9Q6PD62 1173 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 PDCL2Q8N4E4 241 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 NYXQ9GZU5 481 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 IGSF3O75054 1194 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 KRT2P35908 639 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 TROAPQ12815 778 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 CT47A1Q5JQC4 288 aaPredicted RBP16.32■□□□□ 0.2
LIPA-202ENST00000336233 IFIT1BQ5T764 474 aaKnown RBP16.32■□□□□ 0.2
LIPA-202ENST00000336233 RC3H1Q5TC82 1133 aaKnown RBP16.32■□□□□ 0.2
LIPA-202ENST00000336233 IQCA1Q86XH1 822 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 SMAP1Q8IYB5 467 aaPredicted RBP16.32■□□□□ 0.2
LIPA-202ENST00000336233 CMTR1Q8N1G2 835 aaKnown RBP16.32■□□□□ 0.2
LIPA-202ENST00000336233 CELF1Q92879 486 aaKnown RBP16.32■□□□□ 0.2
LIPA-202ENST00000336233 NSUN4Q96CB9 384 aaKnown RBP16.32■□□□□ 0.2
LIPA-202ENST00000336233 TMX1Q9H3N1 280 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 PDE4BQ07343 736 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 PPP1R13BQ96KQ4 1090 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 ANKRD2Q9GZV1 360 aa16.32■□□□□ 0.2
LIPA-202ENST00000336233 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 TRIM75PA6NK02 468 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 FOXN1O15353 648 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 POLR2DO15514 142 aaKnown RBP16.31■□□□□ 0.2
LIPA-202ENST00000336233 CCP110O43303 1012 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 NT5C2P49902 561 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 DPF2Q92785 391 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 TNFRSF25Q93038 417 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 SERTAD1Q9UHV2 236 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 WTIPA6NIX2 430 aaPredicted RBP16.31■□□□□ 0.2
LIPA-202ENST00000336233 SERPINC1P01008 464 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 ZNF18P17022 549 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 KIF18AQ8NI77 898 aa16.31■□□□□ 0.2
LIPA-202ENST00000336233 ENOX1Q8TC92 643 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms