RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 IGDCC4Q8TDY8 1250 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 AIDAQ96BJ3 306 aa23.49■■□□□ 1.35
SPNS1-203ENST00000334536 E2F4Q16254 413 aa23.48■■□□□ 1.35
SPNS1-203ENST00000334536 EP400NLQ6ZTU2 488 aa23.48■■□□□ 1.35
SPNS1-203ENST00000334536 RAB11FIP4Q86YS3 637 aa23.48■■□□□ 1.35
SPNS1-203ENST00000334536 WWC3Q9ULE0 1092 aa23.48■■□□□ 1.35
SPNS1-203ENST00000334536 NEDD4P46934 1319 aa23.48■■□□□ 1.35
SPNS1-203ENST00000334536 NUP98P52948 1817 aa23.48■■□□□ 1.35
SPNS1-203ENST00000334536 CCDC189A1A4V9 331 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 GOLGA6L9A6NEM1 432 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 ZBTB43O43298 467 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 C21orf2O43822 256 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 LIFRP42702 1097 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 TRIM65Q6PJ69 517 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 HDXQ7Z353 690 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 STK36Q9NRP7 1315 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 MAP3K12Q12852 859 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 DNAJC21Q5F1R6 531 aaKnown RBP23.47■■□□□ 1.35
SPNS1-203ENST00000334536 KRT40Q6A162 431 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 GOLGA1Q92805 767 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 CNNM2Q9H8M5 875 aa23.47■■□□□ 1.35
SPNS1-203ENST00000334536 FAM237AA0A1B0GTK4 181 aa23.46■■□□□ 1.35
SPNS1-203ENST00000334536 B4E1Z4 1266 aa23.46■■□□□ 1.35
SPNS1-203ENST00000334536 URI1O94763 535 aaPredicted RBP23.46■■□□□ 1.35
SPNS1-203ENST00000334536 PFKFB1P16118 471 aa23.46■■□□□ 1.35
SPNS1-203ENST00000334536 SPATA5Q8NB90 893 aa23.46■■□□□ 1.35
SPNS1-203ENST00000334536 VPS18Q9P253 973 aa23.46■■□□□ 1.35
SPNS1-203ENST00000334536 PHLPP1O60346 1717 aa23.46■■□□□ 1.35
SPNS1-203ENST00000334536 VPS37DQ86XT2 251 aa23.45■■□□□ 1.35
SPNS1-203ENST00000334536 FAM71BQ8TC56 605 aa23.45■■□□□ 1.35
SPNS1-203ENST00000334536 PARD6BQ9BYG5 372 aa23.45■■□□□ 1.35
SPNS1-203ENST00000334536 LY9Q9HBG7 655 aa23.45■■□□□ 1.35
SPNS1-203ENST00000334536 GJB4Q9NTQ9 266 aa23.45■■□□□ 1.35
SPNS1-203ENST00000334536 UBN2Q6ZU65 1347 aa23.45■■□□□ 1.35
SPNS1-203ENST00000334536 TXLNAP40222 546 aa23.45■■□□□ 1.34
SPNS1-203ENST00000334536 IARSP41252 1262 aaKnown RBP23.45■■□□□ 1.34
SPNS1-203ENST00000334536 USP5P45974 858 aa23.45■■□□□ 1.34
SPNS1-203ENST00000334536 PIP4K2BP78356 416 aa23.45■■□□□ 1.34
SPNS1-203ENST00000334536 MAP3K9P80192 1104 aa23.45■■□□□ 1.34
SPNS1-203ENST00000334536 TRIM29Q14134 588 aa23.45■■□□□ 1.34
SPNS1-203ENST00000334536 NTRK3Q16288 839 aa23.45■■□□□ 1.34
SPNS1-203ENST00000334536 NID2Q14112 1375 aa23.45■■□□□ 1.34
SPNS1-203ENST00000334536 COL22A1Q8NFW1 1626 aaPredicted RBP23.45■■□□□ 1.34
SPNS1-203ENST00000334536 COL14A1Q05707 1796 aaKnown RBP23.45■■□□□ 1.34
SPNS1-203ENST00000334536 GOLGA8AA7E2F4 631 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 EXOC5O00471 708 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 ZSCAN12O43309 604 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 CDC27P30260 824 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 DPCR1Q3MIW9 517 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 TMEM67Q5HYA8 995 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 NFXL1Q6ZNB6 911 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 IFNL3Q8IZI9 196 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 KRT23Q9C075 422 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 DENND2AQ9ULE3 1009 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 HPSEQ9Y251 543 aa23.44■■□□□ 1.34
SPNS1-203ENST00000334536 A0A087WWV3 80 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 TOM1O60784 492 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 GNAT2P19087 354 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 ARMCX5Q6P1M9 558 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 LRRC31Q6UY01 552 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 WASF1Q92558 559 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 MTA3Q9BTC8 594 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 NAPBQ9H115 298 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 PLCH1Q4KWH8 1693 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 IKBKBO14920 756 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 ERLIN1O75477 346 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 WDHD1O75717 1129 aaPredicted RBP23.43■■□□□ 1.34
SPNS1-203ENST00000334536 PTPAQ15257 358 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 ERCC4Q92889 916 aaPredicted RBP23.43■■□□□ 1.34
SPNS1-203ENST00000334536 ACBD3Q9H3P7 528 aa23.43■■□□□ 1.34
SPNS1-203ENST00000334536 COL16A1Q07092 1604 aaPredicted RBP23.43■■□□□ 1.34
SPNS1-203ENST00000334536 TIAM2Q8IVF5 1701 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 SYKP43405 635 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 PPP2R3AQ06190 1150 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 GNL2Q13823 731 aaKnown RBP23.42■■□□□ 1.34
SPNS1-203ENST00000334536 TBC1D22AQ8WUA7 517 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.42■■□□□ 1.34
SPNS1-203ENST00000334536 FAM217BQ9NTX9 383 aaPredicted RBP23.42■■□□□ 1.34
SPNS1-203ENST00000334536 TUBE1Q9UJT0 475 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 MRFAP1Q9Y605 127 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 DOCK2Q92608 1830 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 TUBBP07437 444 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 SSRP1Q08945 709 aaKnown RBP23.42■■□□□ 1.34
SPNS1-203ENST00000334536 MICU3Q86XE3 530 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 NKX2-3Q8TAU0 364 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 AIFM3Q96NN9 605 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 MAP3K14Q99558 947 aa23.42■■□□□ 1.34
SPNS1-203ENST00000334536 EPB41L4AQ9HCS5 686 aaPredicted RBP23.42■■□□□ 1.34
SPNS1-203ENST00000334536 MYO5AQ9Y4I1 1855 aaKnown RBP23.41■■□□□ 1.34
SPNS1-203ENST00000334536 CUTAO60888 179 aa23.41■■□□□ 1.34
SPNS1-203ENST00000334536 MBD4O95243 580 aa23.41■■□□□ 1.34
SPNS1-203ENST00000334536 AKNAD1Q5T1N1 836 aa23.41■■□□□ 1.34
SPNS1-203ENST00000334536 MAGEB6Q8N7X4 407 aa23.41■■□□□ 1.34
SPNS1-203ENST00000334536 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.41■■□□□ 1.34
SPNS1-203ENST00000334536 SLC12A7Q9Y666 1083 aa23.41■■□□□ 1.34
SPNS1-203ENST00000334536 RTL9Q8NET4 1388 aa23.41■■□□□ 1.34
SPNS1-203ENST00000334536 PNPLA7Q6ZV29 1317 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 IFIT3O14879 490 aaKnown RBP23.4■■□□□ 1.34
SPNS1-203ENST00000334536 ERLIN2O94905 339 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 FMNL1O95466 1100 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms