RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 FMNL1O95466 1100 aaPredicted RBP10.39□□□□□ -0.75
TREM1-202ENST00000334475 TM4SF1P30408 202 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 KIF23Q02241 960 aaPredicted RBP10.39□□□□□ -0.75
TREM1-202ENST00000334475 CTDSPL2Q05D32 466 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 FAM160A1Q05DH4 1040 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 TYRO3Q06418 890 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 GRAPQ13588 217 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 TRIM29Q14134 588 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 SASS6Q6UVJ0 657 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 NLGN1Q8N2Q7 840 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 GRAPLQ8TC17 118 aaPredicted RBP10.39□□□□□ -0.75
TREM1-202ENST00000334475 ALG1Q9BT22 464 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 ATP8A2Q9NTI2 1148 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 RNF181Q9P0P0 153 aa10.39□□□□□ -0.75
TREM1-202ENST00000334475 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.39□□□□□ -0.75
TREM1-202ENST00000334475 XDHP47989 1333 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 POLRMTO00411 1230 aaKnown RBP10.38□□□□□ -0.75
TREM1-202ENST00000334475 PRKAB2O43741 272 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 KINO60870 393 aaKnown RBP10.38□□□□□ -0.75
TREM1-202ENST00000334475 TPM3P06753 285 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 SLC3A2P08195 630 aaKnown RBP10.38□□□□□ -0.75
TREM1-202ENST00000334475 CALM1P0DP23 149 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 CALM2P0DP24 149 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 CALM3P0DP25 149 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 SSRP1Q08945 709 aaKnown RBP10.38□□□□□ -0.75
TREM1-202ENST00000334475 STK38Q15208 465 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 RTN1Q16799 776 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 SBK1Q52WX2 424 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 MICU3Q86XE3 530 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 CCAR1Q8IX12 1150 aaKnown RBP10.38□□□□□ -0.75
TREM1-202ENST00000334475 TRIM22Q8IYM9 498 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 CNBD1Q8NA66 436 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 MIGA1Q8NAN2 632 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 LINC00301Q8NCQ3 95 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 WDR66Q8TBY9 1149 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 MRPS27Q92552 414 aaKnown RBP10.38□□□□□ -0.75
TREM1-202ENST00000334475 NSUN4Q96CB9 384 aaKnown RBP10.38□□□□□ -0.75
TREM1-202ENST00000334475 UBAC1Q9BSL1 405 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 CRNKL1Q9BZJ0 848 aaKnown RBP10.38□□□□□ -0.75
TREM1-202ENST00000334475 ARPP21Q9UBL0 812 aaPredicted RBP10.38□□□□□ -0.75
TREM1-202ENST00000334475 USP25Q9UHP3 1055 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 ZKSCAN5Q9Y2L8 839 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 NRXN2Q9P2S2 1712 aa10.38□□□□□ -0.75
TREM1-202ENST00000334475 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
TREM1-202ENST00000334475 NPHP1O15259 732 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 SPTLC2O15270 562 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 ORC4O43929 436 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 ZNF500O60304 480 aaPredicted RBP10.37□□□□□ -0.75
TREM1-202ENST00000334475 PPP6R2O75170 966 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 NR1I2O75469 434 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 DEXIO95424 95 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 CDC27P30260 824 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 GSTO1P78417 241 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 ST5P78524 1137 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 GUCY1B3Q02153 619 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 LTBP1Q14766 1721 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 NFIXQ14938 502 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
TREM1-202ENST00000334475 ANO1Q5XXA6 986 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 KRT40Q6A162 431 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 TMC4Q7Z404 712 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 ZNF654Q8IZM8 581 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 ENGASEQ8NFI3 743 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 FAM217BQ9NTX9 383 aaPredicted RBP10.37□□□□□ -0.75
TREM1-202ENST00000334475 RBM28Q9NW13 759 aaKnown RBP10.37□□□□□ -0.75
TREM1-202ENST00000334475 PIM2Q9P1W9 311 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 PARP3Q9Y6F1 533 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 MRVI1Q9Y6F6 885 aa10.37□□□□□ -0.75
TREM1-202ENST00000334475 MORC2Q9Y6X9 1032 aaPredicted RBP10.37□□□□□ -0.75
TREM1-202ENST00000334475 CDK5RAP2Q96SN8 1893 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 DDX60LQ5H9U9 1706 aaKnown RBP10.36□□□□□ -0.75
TREM1-202ENST00000334475 FOCADQ5VW36 1801 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 GOLGA6L6A8MZA4 724 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 DDAH1O94760 285 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 ATP2B4P23634 1241 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 U2AF2P26368 475 aaKnown RBP eCLIP10.36□□□□□ -0.75
TREM1-202ENST00000334475 ME1P48163 572 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 FOSBP53539 338 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 MECOMQ03112 1051 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 FSTL1Q12841 308 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 SAFBQ15424 915 aaKnown RBP eCLIP10.36□□□□□ -0.75
TREM1-202ENST00000334475 SEC23AQ15436 765 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 STX1AQ16623 288 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 CRY2Q49AN0 593 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 CCDC178Q5BJE1 867 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 DALRD3Q5D0E6 543 aaKnown RBP10.36□□□□□ -0.75
TREM1-202ENST00000334475 ZNF804AQ7Z570 1209 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 ADGRA1Q86SQ6 560 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 IQCA1Q86XH1 822 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 FSIP1Q8NA03 581 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 TDRD7Q8NHU6 1098 aaKnown RBP10.36□□□□□ -0.75
TREM1-202ENST00000334475 TIGD1Q96MW7 591 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 RNF26Q9BY78 433 aaPredicted RBP10.36□□□□□ -0.75
TREM1-202ENST00000334475 TOMM22Q9NS69 142 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 PCDHA7Q9UN72 937 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 IQSEC3Q9UPP2 1182 aaPredicted RBP10.36□□□□□ -0.75
TREM1-202ENST00000334475 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
TREM1-202ENST00000334475 TACC3Q9Y6A5 838 aa10.36□□□□□ -0.75
TREM1-202ENST00000334475 TNKSO95271 1327 aa10.35□□□□□ -0.75
TREM1-202ENST00000334475 FAM237AA0A1B0GTK4 181 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms