RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SYKP43405 635 aa20.07■□□□□ 0.8
DDX28-201ENST00000332395 PRR5LQ6MZQ0 368 aa20.07■□□□□ 0.8
DDX28-201ENST00000332395 DRC7Q8IY82 874 aa20.07■□□□□ 0.8
DDX28-201ENST00000332395 TIGD1Q96MW7 591 aa20.07■□□□□ 0.8
DDX28-201ENST00000332395 MYH6P13533 1939 aa20.07■□□□□ 0.8
DDX28-201ENST00000332395 KIAA1551Q9HCM1 1747 aa20.07■□□□□ 0.8
DDX28-201ENST00000332395 XDHP47989 1333 aa20.06■□□□□ 0.8
DDX28-201ENST00000332395 UQCRHLA0A096LP55 91 aa20.06■□□□□ 0.8
DDX28-201ENST00000332395 UQCRHP07919 91 aa20.06■□□□□ 0.8
DDX28-201ENST00000332395 TOB1P50616 345 aaPredicted RBP20.06■□□□□ 0.8
DDX28-201ENST00000332395 NOLC1Q14978 699 aaKnown RBP eCLIP20.06■□□□□ 0.8
DDX28-201ENST00000332395 ZRSR1Q15695 479 aaKnown RBP20.06■□□□□ 0.8
DDX28-201ENST00000332395 RESP18Q5W5W9 173 aa20.06■□□□□ 0.8
DDX28-201ENST00000332395 FBXW7Q969H0 707 aa20.06■□□□□ 0.8
DDX28-201ENST00000332395 CLIC6Q96NY7 704 aa20.06■□□□□ 0.8
DDX28-201ENST00000332395 TRPC5Q9UL62 973 aaPredicted RBP20.06■□□□□ 0.8
DDX28-201ENST00000332395 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 FAM237AA0A1B0GTK4 181 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 CUTAO60888 179 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 PTGS1P23219 599 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 AKAP17AQ02040 695 aaKnown RBP20.05■□□□□ 0.8
DDX28-201ENST00000332395 TROAPQ12815 778 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 SBK1Q52WX2 424 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 CALM1P0DP23 149 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 CALM2P0DP24 149 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 CALM3P0DP25 149 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 FUT2Q10981 343 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 NR5A1Q13285 461 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 DPCR1Q3MIW9 517 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 RILPL1Q5EBL4 403 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 WDR66Q8TBY9 1149 aa20.05■□□□□ 0.8
DDX28-201ENST00000332395 RBM28Q9NW13 759 aaKnown RBP20.05■□□□□ 0.8
DDX28-201ENST00000332395 CYP2D6P10635 497 aa20.04■□□□□ 0.8
DDX28-201ENST00000332395 CDC25BP30305 580 aa20.04■□□□□ 0.8
DDX28-201ENST00000332395 C17orf53Q8N3J3 647 aaPredicted RBP20.04■□□□□ 0.8
DDX28-201ENST00000332395 AOPEPQ8N6M6 819 aa20.04■□□□□ 0.8
DDX28-201ENST00000332395 RPGRQ92834 1020 aaKnown RBP20.04■□□□□ 0.8
DDX28-201ENST00000332395 FAM13BQ9NYF5 915 aa20.04■□□□□ 0.8
DDX28-201ENST00000332395 DDAH1O94760 285 aa20.04■□□□□ 0.8
DDX28-201ENST00000332395 LDHBP07195 334 aaKnown RBP20.04■□□□□ 0.8
DDX28-201ENST00000332395 RBM6P78332 1123 aaKnown RBP20.04■□□□□ 0.8
DDX28-201ENST00000332395 CCDC186Q7Z3E2 898 aa20.04■□□□□ 0.8
DDX28-201ENST00000332395 KRI1Q8N9T8 703 aaKnown RBP20.04■□□□□ 0.8
DDX28-201ENST00000332395 DYNC1I1O14576 645 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 PLEKHA8P1O95397 391 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 PKN1Q16512 942 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 FAM47AQ5JRC9 791 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 ZNF804AQ7Z570 1209 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 KIAA1524Q8TCG1 905 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 OXER1Q8TDS5 423 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 SPTLC3Q9NUV7 552 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 CLIP2Q9UDT6 1046 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 PYCARDQ9ULZ3 195 aa20.03■□□□□ 0.8
DDX28-201ENST00000332395 PRPF3O43395 683 aaKnown RBP20.02■□□□□ 0.8
DDX28-201ENST00000332395 NMT2O60551 498 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 IGSF3O75054 1194 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 GYS1P13807 737 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 XBP1P17861 261 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 NLRP12P59046 1061 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 PDE4BQ07343 736 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 CERKQ8TCT0 537 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 SHISA4Q96DD7 197 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 MRFAP1L1Q96HT8 127 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 BPIFA3Q9BQP9 254 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 MCM9Q9NXL9 1143 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 NRBP1Q9UHY1 535 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 BIN1O00499 593 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 CRY2Q49AN0 593 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 GPR101Q96P66 508 aaPredicted RBP20.02■□□□□ 0.8
DDX28-201ENST00000332395 VPS54Q9P1Q0 977 aa20.02■□□□□ 0.8
DDX28-201ENST00000332395 HSPA1LP34931 641 aa20.01■□□□□ 0.79
DDX28-201ENST00000332395 C15orf52Q6ZUT6 534 aaKnown RBP20.01■□□□□ 0.79
DDX28-201ENST00000332395 TMTC3Q6ZXV5 915 aa20.01■□□□□ 0.79
DDX28-201ENST00000332395 MTERF4Q7Z6M4 381 aaKnown RBP20.01■□□□□ 0.79
DDX28-201ENST00000332395 V9GY48 417 aaPredicted RBP20.01■□□□□ 0.79
DDX28-201ENST00000332395 EP400Q96L91 3159 aa20.01■□□□□ 0.79
DDX28-201ENST00000332395 hCG_1642624A0A1W2PR95 340 aa20.01■□□□□ 0.79
DDX28-201ENST00000332395 USP17L8P0C7I0 530 aa20.01■□□□□ 0.79
DDX28-201ENST00000332395 ST5P78524 1137 aa20.01■□□□□ 0.79
DDX28-201ENST00000332395 GPSM2P81274 684 aa20.01■□□□□ 0.79
DDX28-201ENST00000332395 MKRN1Q9UHC7 482 aaKnown RBP20.01■□□□□ 0.79
DDX28-201ENST00000332395 KCNH3Q9ULD8 1083 aa20.01■□□□□ 0.79
DDX28-201ENST00000332395 PCDHB6Q9Y5E3 794 aa20.01■□□□□ 0.79
DDX28-201ENST00000332395 TSPY2A6NKD2 308 aa20■□□□□ 0.79
DDX28-201ENST00000332395 SERPINB2P05120 415 aa20■□□□□ 0.79
DDX28-201ENST00000332395 PHF20Q9BVI0 1012 aa20■□□□□ 0.79
DDX28-201ENST00000332395 CABP5Q9NP86 173 aa20■□□□□ 0.79
DDX28-201ENST00000332395 TUBE1Q9UJT0 475 aa20■□□□□ 0.79
DDX28-201ENST00000332395 FBXO2Q9UK22 296 aaPredicted RBP20■□□□□ 0.79
DDX28-201ENST00000332395 PTPREP23469 700 aa20■□□□□ 0.79
DDX28-201ENST00000332395 USP5P45974 858 aa20■□□□□ 0.79
DDX28-201ENST00000332395 GSTO1P78417 241 aa20■□□□□ 0.79
DDX28-201ENST00000332395 DIXDC1Q155Q3 683 aa20■□□□□ 0.79
DDX28-201ENST00000332395 GRIK5Q16478 980 aa20■□□□□ 0.79
DDX28-201ENST00000332395 SLC4A8Q2Y0W8 1093 aa20■□□□□ 0.79
DDX28-201ENST00000332395 DNTTIP2Q5QJE6 756 aaKnown RBP20■□□□□ 0.79
DDX28-201ENST00000332395 CTCFLQ8NI51 663 aaPredicted RBP20■□□□□ 0.79
DDX28-201ENST00000332395 SH3RF3Q8TEJ3 882 aaPredicted RBP20■□□□□ 0.79
DDX28-201ENST00000332395 CNTNAP5Q8WYK1 1306 aa19.99■□□□□ 0.79
DDX28-201ENST00000332395 KRT2P35908 639 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 496.1 ms