RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 PSMD1Q99460 953 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 AGXT2Q9BYV1 514 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 WDR19Q8NEZ3 1342 aa12.95□□□□□ -0.34
TRIM59-201ENST00000309784 CDC27P30260 824 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 KRT85P78386 507 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 FAM163AQ96GL9 167 aaPredicted RBP12.94□□□□□ -0.34
TRIM59-201ENST00000309784 CD2APQ9Y5K6 639 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 CCDC88AQ3V6T2 1871 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 GAKO14976 1311 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 RSBN1LQ6PCB5 846 aaPredicted RBP12.94□□□□□ -0.34
TRIM59-201ENST00000309784 FANCBQ8NB91 859 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 SERPINB13Q9UIV8 391 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 MYH2Q9UKX2 1941 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 SAFBQ15424 915 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRIM59-201ENST00000309784 CSPP1Q1MSJ5 1256 aa12.94□□□□□ -0.34
TRIM59-201ENST00000309784 DDX4Q9NQI0 724 aaKnown RBP12.94□□□□□ -0.34
TRIM59-201ENST00000309784 ATP2B1P20020 1258 aa12.93□□□□□ -0.34
TRIM59-201ENST00000309784 SKOR2Q2VWA4 1001 aaPredicted RBP12.93□□□□□ -0.34
TRIM59-201ENST00000309784 GJB4Q9NTQ9 266 aa12.93□□□□□ -0.34
TRIM59-201ENST00000309784 HPS5Q9UPZ3 1129 aa12.93□□□□□ -0.34
TRIM59-201ENST00000309784 ORC4O43929 436 aa12.93□□□□□ -0.34
TRIM59-201ENST00000309784 CTDNEP1O95476 244 aa12.93□□□□□ -0.34
TRIM59-201ENST00000309784 APOBEC3HQ6NTF7 200 aaKnown RBP12.93□□□□□ -0.34
TRIM59-201ENST00000309784 CAVIN1Q6NZI2 390 aaKnown RBP12.93□□□□□ -0.34
TRIM59-201ENST00000309784 AIFM3Q96NN9 605 aa12.93□□□□□ -0.34
TRIM59-201ENST00000309784 DOCK2Q92608 1830 aa12.93□□□□□ -0.34
TRIM59-201ENST00000309784 PDIA4P13667 645 aaKnown RBP12.93□□□□□ -0.34
TRIM59-201ENST00000309784 SF3A1Q15459 793 aaKnown RBP12.93□□□□□ -0.34
TRIM59-201ENST00000309784 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
TRIM59-201ENST00000309784 SGMS1Q86VZ5 419 aa12.93□□□□□ -0.34
TRIM59-201ENST00000309784 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
TRIM59-201ENST00000309784 SCAF8Q9UPN6 1271 aaKnown RBP12.93□□□□□ -0.34
TRIM59-201ENST00000309784 WDHD1O75717 1129 aaPredicted RBP12.92□□□□□ -0.34
TRIM59-201ENST00000309784 CXCL9Q07325 125 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 PNMA1Q8ND90 353 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 OSBPL5Q9H0X9 879 aaPredicted RBP12.92□□□□□ -0.34
TRIM59-201ENST00000309784 XBP1P17861 261 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 WASF1Q92558 559 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 MYO3BQ8WXR4 1341 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 NRXN2Q9P2S2 1712 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 CALM1P0DP23 149 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 CALM2P0DP24 149 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 CALM3P0DP25 149 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 KIF5BP33176 963 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 TNIP1Q15025 636 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 SPATA32Q96LK8 384 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 VAT1LQ9HCJ6 419 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 SERPINA10Q9UK55 444 aa12.92□□□□□ -0.34
TRIM59-201ENST00000309784 SLURP2P0DP57 97 aa12.91□□□□□ -0.34
TRIM59-201ENST00000309784 USP48Q86UV5 1035 aa12.91□□□□□ -0.34
TRIM59-201ENST00000309784 SMARCC2Q8TAQ2 1214 aa12.91□□□□□ -0.34
TRIM59-201ENST00000309784 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
TRIM59-201ENST00000309784 FHDC1Q9C0D6 1143 aaPredicted RBP12.91□□□□□ -0.34
TRIM59-201ENST00000309784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRIM59-201ENST00000309784 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
TRIM59-201ENST00000309784 CHD4Q14839 1912 aa12.91□□□□□ -0.34
TRIM59-201ENST00000309784 RASA1P20936 1047 aa12.91□□□□□ -0.34
TRIM59-201ENST00000309784 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
TRIM59-201ENST00000309784 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
TRIM59-201ENST00000309784 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
TRIM59-201ENST00000309784 GOLGA8HP0CJ92 632 aa12.9□□□□□ -0.34
TRIM59-201ENST00000309784 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
TRIM59-201ENST00000309784 ZFPM1Q8IX07 1006 aa12.9□□□□□ -0.34
TRIM59-201ENST00000309784 BICD2Q8TD16 824 aa12.9□□□□□ -0.34
TRIM59-201ENST00000309784 GSE1Q14687 1217 aa12.9□□□□□ -0.34
TRIM59-201ENST00000309784 CLEC10AQ8IUN9 316 aa12.9□□□□□ -0.34
TRIM59-201ENST00000309784 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
TRIM59-201ENST00000309784 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
TRIM59-201ENST00000309784 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.34
TRIM59-201ENST00000309784 CCDC96Q2M329 555 aa12.9□□□□□ -0.34
TRIM59-201ENST00000309784 C16orf86Q6ZW13 317 aa12.9□□□□□ -0.34
TRIM59-201ENST00000309784 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 FBXL16Q8N461 479 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 ZSCAN16Q9H4T2 348 aaPredicted RBP12.89□□□□□ -0.35
TRIM59-201ENST00000309784 MKRN1Q9UHC7 482 aaKnown RBP12.89□□□□□ -0.35
TRIM59-201ENST00000309784 UBE2Q2LH0YL09 131 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 NFKBIEO00221 500 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 GDF11O95390 407 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 EVCP57679 992 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 HDLBPQ00341 1268 aaKnown RBP12.89□□□□□ -0.35
TRIM59-201ENST00000309784 SEC23AQ15436 765 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 ZNF396Q96N95 335 aaPredicted RBP12.89□□□□□ -0.35
TRIM59-201ENST00000309784 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
TRIM59-201ENST00000309784 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 KCNJ14Q9UNX9 436 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 FDPSP14324 419 aaKnown RBP12.89□□□□□ -0.35
TRIM59-201ENST00000309784 AKR1B1P15121 316 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 TBC1D10BQ4KMP7 808 aaPredicted RBP12.89□□□□□ -0.35
TRIM59-201ENST00000309784 KRT40Q6A162 431 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 CEP95Q96GE4 821 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 DHX36Q9H2U1 1008 aaKnown RBP12.89□□□□□ -0.35
TRIM59-201ENST00000309784 CABP5Q9NP86 173 aa12.89□□□□□ -0.35
TRIM59-201ENST00000309784 PTGER2P43116 358 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
TRIM59-201ENST00000309784 MTA3Q9BTC8 594 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 CFAP45Q9UL16 551 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
TRIM59-201ENST00000309784 DDTLA6NHG4 134 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms