RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
PTPN2-201ENST00000309660 CTCFLQ8NI51 663 aaPredicted RBP13.25□□□□□ -0.29
PTPN2-201ENST00000309660 HPSEQ9Y251 543 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 RFC4P35249 363 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 MYL5Q02045 173 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 SEC23AQ15436 765 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 PTPN14Q15678 1187 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 ZNF174Q15697 407 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
PTPN2-201ENST00000309660 KLHL10Q6JEL2 608 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 FANCLQ9NW38 375 aa13.25□□□□□ -0.29
PTPN2-201ENST00000309660 RTL9Q8NET4 1388 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 MYH15Q9Y2K3 1946 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 PRR29P0C7W0 189 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 USP5P45974 858 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 GLIPR1L2Q4G1C9 344 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 EARS2Q5JPH6 523 aaKnown RBP13.24□□□□□ -0.29
PTPN2-201ENST00000309660 STAMQ92783 540 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 CSRNP2Q9H175 543 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
PTPN2-201ENST00000309660 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 CASP1P29466 404 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 NCAPHQ15003 741 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 CEP135Q66GS9 1140 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 CCDC112Q8NEF3 446 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 DPF2Q92785 391 aa13.24□□□□□ -0.29
PTPN2-201ENST00000309660 ARHGEF1Q92888 912 aaKnown RBP13.24□□□□□ -0.29
PTPN2-201ENST00000309660 HOOK1Q9UJC3 728 aaKnown RBP13.24□□□□□ -0.29
PTPN2-201ENST00000309660 TRIM75PA6NK02 468 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 DIXDC1Q155Q3 683 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 DCP1AQ9NPI6 582 aaPredicted RBP13.23□□□□□ -0.29
PTPN2-201ENST00000309660 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.23□□□□□ -0.29
PTPN2-201ENST00000309660 KRT2P35908 639 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 CCZ1BP86790 482 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
PTPN2-201ENST00000309660 POSTNQ15063 836 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 EPSTI1Q96J88 318 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 TIGD1Q96MW7 591 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPN2-201ENST00000309660 FBXO2Q9UK22 296 aaPredicted RBP13.23□□□□□ -0.29
PTPN2-201ENST00000309660 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
PTPN2-201ENST00000309660 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 GSDMDP57764 484 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 PDE4BQ07343 736 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 NAA30Q147X3 362 aaPredicted RBP13.23□□□□□ -0.29
PTPN2-201ENST00000309660 CREBRFQ8IUR6 639 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 SMARCE1Q969G3 411 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 RNF26Q9BY78 433 aaPredicted RBP13.23□□□□□ -0.29
PTPN2-201ENST00000309660 BRMS1Q9HCU9 246 aa13.23□□□□□ -0.29
PTPN2-201ENST00000309660 NRDCO43847 1150 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 NEMFO60524 1076 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 PTPREP23469 700 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 NLRP5P59047 1200 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 FBXO33Q7Z6M2 555 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 DYNLL2Q96FJ2 89 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 C4AP0C0L4 1744 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 C4BP0C0L5 1744 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 SHISA4Q96DD7 197 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 BRIP1Q9BX63 1249 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 TUBE1Q9UJT0 475 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 USP21Q9UK80 565 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 CEP131Q9UPN4 1083 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 LRP5O75197 1615 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 VWA3AA6NCI4 1184 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 VEGFAP15692 232 aaPredicted RBP13.22□□□□□ -0.29
PTPN2-201ENST00000309660 NFIXQ14938 502 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 ARMCX5Q6P1M9 558 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 ANKRD2Q9GZV1 360 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 MKNK2Q9HBH9 465 aa13.22□□□□□ -0.29
PTPN2-201ENST00000309660 SAP30BPQ9UHR5 308 aaKnown RBP13.22□□□□□ -0.29
PTPN2-201ENST00000309660 PLCH1Q4KWH8 1693 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 TMEM232C9JQI7 657 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 WNT7AO00755 349 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 STX17P56962 302 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 TROAPQ12815 778 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 PKN1Q16512 942 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 PIK3AP1Q6ZUJ8 805 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 STX8Q9UNK0 236 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 BMP6P22004 513 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 ANAPC4Q9UJX5 808 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 MAN1B1Q9UKM7 699 aa13.21□□□□□ -0.29
PTPN2-201ENST00000309660 MCM7P33993 719 aa13.21□□□□□ -0.3
PTPN2-201ENST00000309660 TFAP4Q01664 338 aa13.21□□□□□ -0.3
PTPN2-201ENST00000309660 FAM196AQ6ZSG2 479 aa13.21□□□□□ -0.3
PTPN2-201ENST00000309660 FAM177A1Q8N128 213 aaPredicted RBP13.21□□□□□ -0.3
PTPN2-201ENST00000309660 SRBD1Q8N5C6 995 aaKnown RBP13.21□□□□□ -0.3
PTPN2-201ENST00000309660 BPIFA3Q9BQP9 254 aa13.21□□□□□ -0.3
PTPN2-201ENST00000309660 NFE2L3Q9Y4A8 694 aa13.21□□□□□ -0.3
PTPN2-201ENST00000309660 BAZ2AQ9UIF9 1905 aaKnown RBP13.2□□□□□ -0.3
PTPN2-201ENST00000309660 COBLO75128 1261 aa13.2□□□□□ -0.3
PTPN2-201ENST00000309660 LDHBP07195 334 aaKnown RBP13.2□□□□□ -0.3
PTPN2-201ENST00000309660 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
PTPN2-201ENST00000309660 SLC44A5Q8NCS7 719 aa13.2□□□□□ -0.3
PTPN2-201ENST00000309660 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms