RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 TTF2Q9UNY4 1162 aaKnown RBP11.1□□□□□ -0.63
TMOD3-201ENST00000308580 NLRP1Q9C000 1473 aa11.1□□□□□ -0.63
TMOD3-201ENST00000308580 CETN3O15182 167 aa11.1□□□□□ -0.63
TMOD3-201ENST00000308580 CAPN2P17655 700 aa11.1□□□□□ -0.63
TMOD3-201ENST00000308580 SPECC1LQ69YQ0 1117 aa11.1□□□□□ -0.63
TMOD3-201ENST00000308580 ARPP21Q9UBL0 812 aaPredicted RBP11.1□□□□□ -0.63
TMOD3-201ENST00000308580 SCRN1Q12765 414 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 MFSD14BQ5SR56 506 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 CYP26C1Q6V0L0 522 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 REXO1Q8N1G1 1221 aaKnown RBP11.09□□□□□ -0.63
TMOD3-201ENST00000308580 PCDHA7Q9UN72 937 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 PLCB3Q01970 1234 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 RAD51AP2Q09MP3 1159 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 IKBKGQ9Y6K9 419 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 ERBB3P21860 1342 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 CHRNDQ07001 517 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 LONRF3Q496Y0 759 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 ZMYM1Q5SVZ6 1142 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 ZSCAN10Q96SZ4 725 aaPredicted RBP11.09□□□□□ -0.63
TMOD3-201ENST00000308580 NAPGQ99747 312 aaPredicted RBP11.09□□□□□ -0.63
TMOD3-201ENST00000308580 EPB41P11171 864 aaKnown RBP11.09□□□□□ -0.63
TMOD3-201ENST00000308580 GTF2IP78347 998 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 NCAPH2Q6IBW4 605 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 LZTS2Q9BRK4 669 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 FRMD4BQ9Y2L6 1034 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 GRIPAP1Q4V328 841 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 TBC1D22AQ8WUA7 517 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 GLT8D2Q9H1C3 349 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 VPS18Q9P253 973 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 TUBBP07437 444 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 UBE3CQ15386 1083 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 CABP7Q86V35 215 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 FBXO18Q8NFZ0 1043 aa11.09□□□□□ -0.63
TMOD3-201ENST00000308580 DNAJC21Q5F1R6 531 aaKnown RBP11.08□□□□□ -0.64
TMOD3-201ENST00000308580 HOMER2Q9NSB8 354 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 ZNF827Q17R98 1081 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 NELFBQ8WX92 580 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 TBC1D7Q9P0N9 293 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 LOC102724428A0A0B4J2F2 783 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 SIK1P57059 783 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 GPR108Q9NPR9 543 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 ATP6V0A2Q9Y487 856 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 ZMYM6O95789 1325 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 TNNC1P63316 161 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 CALCRLQ16602 461 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 DPH6Q7L8W6 267 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 TMTC1Q8IUR5 882 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 A0A1W2PRG0 241 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 TLDC2A0PJX2 215 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 SMCO2A6NFE2 343 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 POLD1P28340 1107 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 CCDC50Q8IVM0 306 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 CMA1P23946 247 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 USH1GQ495M9 461 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 NELFCDQ8IXH7 590 aa11.08□□□□□ -0.64
TMOD3-201ENST00000308580 B4DLN1 442 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 PI16Q6UXB8 463 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 CCDC77Q9BR77 488 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 CARD10Q9BWT7 1032 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 USP21Q9UK80 565 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 ELF2Q15723 593 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 PNMA1Q8ND90 353 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 CLIC6Q96NY7 704 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 SLF1Q9BQI6 1058 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 TSGA10Q9BZW7 698 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 LRMPQ12912 555 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 GSTA5Q7RTV2 222 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 MYRIPQ8NFW9 859 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 BIN2Q9UBW5 565 aaPredicted RBP11.07□□□□□ -0.64
TMOD3-201ENST00000308580 HARSP12081 509 aaKnown RBP11.07□□□□□ -0.64
TMOD3-201ENST00000308580 TERF1P54274 439 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 CUL4AQ13619 759 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 CPXCR1Q8N123 301 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 LARGE2Q8N3Y3 721 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 JAKMIP2Q96AA8 810 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.07□□□□□ -0.64
TMOD3-201ENST00000308580 CIAO1O76071 339 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 BIRC3Q13489 604 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 RNASE9P60153 205 aaKnown RBP11.07□□□□□ -0.64
TMOD3-201ENST00000308580 PTPN12Q05209 780 aaKnown RBP11.07□□□□□ -0.64
TMOD3-201ENST00000308580 FERMT1Q9BQL6 677 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 INCENPQ9NQS7 918 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 GJA3Q9Y6H8 435 aa11.07□□□□□ -0.64
TMOD3-201ENST00000308580 CCDC169A6NNP5 214 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 ECM2O94769 699 aaPredicted RBP11.06□□□□□ -0.64
TMOD3-201ENST00000308580 CFBP00751 764 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 ADKP55263 362 aaKnown RBP11.06□□□□□ -0.64
TMOD3-201ENST00000308580 TIGD1Q96MW7 591 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 USP40Q9NVE5 1235 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 OGFRQ9NZT2 677 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 ARHGEF35A5YM69 484 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 SMIM23A6NLE4 172 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 MAGEA1P43355 309 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 CFAP58Q5T655 872 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 BLIDQ8IZY5 108 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 PAIP2Q9BPZ3 127 aaKnown RBP11.06□□□□□ -0.64
TMOD3-201ENST00000308580 CLIC4Q9Y696 253 aa11.06□□□□□ -0.64
TMOD3-201ENST00000308580 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms