RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 LARP1BQ659C4 914 aaKnown RBP15.2■□□□□ 0.02
CCDC7-202ENST00000302316 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 SYT17Q9BSW7 474 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 TMOD2Q9NZR1 351 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 FAM198AQ9UFP1 575 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 VPS37CA5D8V6 355 aaPredicted RBP15.19■□□□□ 0.02
CCDC7-202ENST00000302316 SERPINB13Q9UIV8 391 aa15.19■□□□□ 0.02
CCDC7-202ENST00000302316 KIF3AQ9Y496 699 aa15.19■□□□□ 0.02
CCDC7-202ENST00000302316 NID2Q14112 1375 aa15.19■□□□□ 0.02
CCDC7-202ENST00000302316 PPFIA3O75145 1194 aa15.19■□□□□ 0.02
CCDC7-202ENST00000302316 NPM3O75607 178 aaKnown RBP15.19■□□□□ 0.02
CCDC7-202ENST00000302316 ZFPM1Q8IX07 1006 aa15.19■□□□□ 0.02
CCDC7-202ENST00000302316 DHX36Q9H2U1 1008 aaKnown RBP15.19■□□□□ 0.02
CCDC7-202ENST00000302316 FZD9O00144 591 aa15.18■□□□□ 0.02
CCDC7-202ENST00000302316 ZSCAN22P10073 491 aaPredicted RBP15.18■□□□□ 0.02
CCDC7-202ENST00000302316 RPS12P25398 132 aaKnown RBP15.18■□□□□ 0.02
CCDC7-202ENST00000302316 CDC27P30260 824 aa15.18■□□□□ 0.02
CCDC7-202ENST00000302316 ADD1P35611 737 aaKnown RBP15.18■□□□□ 0.02
CCDC7-202ENST00000302316 RCAN1P53805 252 aa15.18■□□□□ 0.02
CCDC7-202ENST00000302316 GABPAQ06546 454 aa15.18■□□□□ 0.02
CCDC7-202ENST00000302316 CPLX2Q6PUV4 134 aaKnown RBP15.18■□□□□ 0.02
CCDC7-202ENST00000302316 CATIPQ7Z7H3 387 aa15.18■□□□□ 0.02
CCDC7-202ENST00000302316 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
CCDC7-202ENST00000302316 NUP133Q8WUM0 1156 aa15.18■□□□□ 0.02
CCDC7-202ENST00000302316 CLRN2A0PK11 232 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 CDKL5O76039 1030 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 PDIA4P13667 645 aaKnown RBP15.17■□□□□ 0.02
CCDC7-202ENST00000302316 RTN1Q16799 776 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 MTMR6Q9Y217 621 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 GJA3Q9Y6H8 435 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 ENTPD3O75355 529 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 MCM4P33991 863 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 CCDC178Q5BJE1 867 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 MTMR14Q8NCE2 650 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 EHD4Q9H223 541 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 IL17RBQ9NRM6 502 aa15.17■□□□□ 0.02
CCDC7-202ENST00000302316 ZNF70Q9UC06 446 aaPredicted RBP15.17■□□□□ 0.02
CCDC7-202ENST00000302316 DDTLA6NHG4 134 aaPredicted RBP15.16■□□□□ 0.02
CCDC7-202ENST00000302316 BAG4O95429 457 aaKnown RBP15.16■□□□□ 0.02
CCDC7-202ENST00000302316 LMNB1P20700 586 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 KCNA4P22459 653 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 CRACR2BQ8N4Y2 399 aaPredicted RBP15.16■□□□□ 0.02
CCDC7-202ENST00000302316 MYOZ2Q9NPC6 264 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 TCP11L1Q9NUJ3 509 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 TCP10L2B9ZVM9 353 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 DDAH1O94760 285 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 F13A1P00488 732 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 GMPSP49915 693 aaPredicted RBP15.16■□□□□ 0.02
CCDC7-202ENST00000302316 RCSD1Q6JBY9 416 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 CLEC17AQ6ZS10 378 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 DGKHQ86XP1 1220 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 NEDD1Q8NHV4 660 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 KAT14Q9H8E8 782 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 FAM217BQ9NTX9 383 aaPredicted RBP15.16■□□□□ 0.02
CCDC7-202ENST00000302316 ORC3Q9UBD5 711 aaPredicted RBP15.16■□□□□ 0.02
CCDC7-202ENST00000302316 ZNF541Q9H0D2 1346 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 ATRNL1Q5VV63 1379 aa15.16■□□□□ 0.02
CCDC7-202ENST00000302316 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
CCDC7-202ENST00000302316 MYH8P13535 1937 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 CCDC196A0A1B0GTZ2 297 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 SHTN1A0MZ66 631 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 DDX11L8A8MPP1 907 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 H3BQV1 296 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 MYO1BO43795 1136 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 CALM1P0DP23 149 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 CALM2P0DP24 149 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 CALM3P0DP25 149 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 MMP14P50281 582 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 IFFO2Q5TF58 517 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 CDC37L1Q7L3B6 337 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 SH3BP5LQ7L8J4 393 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 FANCBQ8NB91 859 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 TRIM34Q9BYJ4 488 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 VEZTQ9HBM0 779 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 PI4KBQ9UBF8 816 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 SIPA1L1O43166 1804 aa15.15■□□□□ 0.02
CCDC7-202ENST00000302316 PLIN4Q96Q06 1357 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 FDPSP14324 419 aaKnown RBP15.14■□□□□ 0.01
CCDC7-202ENST00000302316 SHMT1P34896 483 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 FOSBP53539 338 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
CCDC7-202ENST00000302316 NTRK3Q16288 839 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 PHKBQ93100 1093 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 ZBED3Q96IU2 234 aaPredicted RBP15.14■□□□□ 0.01
CCDC7-202ENST00000302316 ANP32EQ9BTT0 268 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 STX8Q9UNK0 236 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 WNT10BO00744 389 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 TROAPQ12815 778 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 PPP2R5BQ15173 497 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 DPF2Q92785 391 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 UTRNP46939 3433 aa15.14■□□□□ 0.01
CCDC7-202ENST00000302316 GOLGA6L22H0YM25 854 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 AKR1B1P15121 316 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 NBPF9Q3BBW0 867 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 FOXD4L6Q3SYB3 417 aaPredicted RBP15.13■□□□□ 0.01
CCDC7-202ENST00000302316 FOXD4L3Q6VB84 417 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms