RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 DDX11Q96FC9 970 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 TMOD2Q9NZR1 351 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 PDCP20941 246 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 NBR1Q14596 966 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 FOXD4L5Q5VV16 416 aaPredicted RBP21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 ZNF654Q8IZM8 581 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 MTMR14Q8NCE2 650 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 FOXD4L4Q8WXT5 416 aaPredicted RBP21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 DHX36Q9H2U1 1008 aaKnown RBP21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 SERPINB13Q9UIV8 391 aa21.66■■□□□ 1.06
SEC61A2-201ENST00000298428 RCAN1P53805 252 aa21.65■■□□□ 1.06
SEC61A2-201ENST00000298428 LARP1BQ659C4 914 aaKnown RBP21.65■■□□□ 1.06
SEC61A2-201ENST00000298428 CCDC144CPQ8IYA2 1237 aa21.65■■□□□ 1.06
SEC61A2-201ENST00000298428 FAM184AQ8NB25 1140 aa21.65■■□□□ 1.06
SEC61A2-201ENST00000298428 NID2Q14112 1375 aa21.65■■□□□ 1.06
SEC61A2-201ENST00000298428 ENTPD3O75355 529 aa21.64■■□□□ 1.06
SEC61A2-201ENST00000298428 LMNB1P20700 586 aa21.64■■□□□ 1.06
SEC61A2-201ENST00000298428 GBP4Q96PP9 640 aa21.64■■□□□ 1.06
SEC61A2-201ENST00000298428 SWAP70Q9UH65 585 aa21.64■■□□□ 1.06
SEC61A2-201ENST00000298428 PDIA4P13667 645 aaKnown RBP21.64■■□□□ 1.05
SEC61A2-201ENST00000298428 ADD1P35611 737 aaKnown RBP21.64■■□□□ 1.05
SEC61A2-201ENST00000298428 MMP14P50281 582 aa21.64■■□□□ 1.05
SEC61A2-201ENST00000298428 CCDC178Q5BJE1 867 aa21.64■■□□□ 1.05
SEC61A2-201ENST00000298428 ZSCAN29Q8IWY8 852 aaPredicted RBP21.64■■□□□ 1.05
SEC61A2-201ENST00000298428 EHD4Q9H223 541 aa21.64■■□□□ 1.05
SEC61A2-201ENST00000298428 TCP11L1Q9NUJ3 509 aa21.64■■□□□ 1.05
SEC61A2-201ENST00000298428 KIF3AQ9Y496 699 aa21.64■■□□□ 1.05
SEC61A2-201ENST00000298428 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.05
SEC61A2-201ENST00000298428 CLRN2A0PK11 232 aa21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 CDC27P30260 824 aa21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 CPLX2Q6PUV4 134 aaKnown RBP21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 CATIPQ7Z7H3 387 aa21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 NUP133Q8WUM0 1156 aa21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 MYOZ2Q9NPC6 264 aa21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 IL17RBQ9NRM6 502 aa21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 ZNF70Q9UC06 446 aaPredicted RBP21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 UTRNP46939 3433 aa21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 ZNF541Q9H0D2 1346 aa21.63■■□□□ 1.05
SEC61A2-201ENST00000298428 DDTLA6NHG4 134 aaPredicted RBP21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 PPFIA3O75145 1194 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 CDKL5O76039 1030 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 ZSCAN22P10073 491 aaPredicted RBP21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 SPDYE2Q495Y8 402 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 DGKHQ86XP1 1220 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 SHTN1A0MZ66 631 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 VPS37CA5D8V6 355 aaPredicted RBP21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 MYO1BO43795 1136 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 GMPSP49915 693 aaPredicted RBP21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 ZNF280AP59817 542 aaPredicted RBP21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 RTN1Q16799 776 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 RCSD1Q6JBY9 416 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 SH3BP5LQ7L8J4 393 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 NEDD1Q8NHV4 660 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 ZBED3Q96IU2 234 aaPredicted RBP21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 FAM217BQ9NTX9 383 aaPredicted RBP21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 PI4KBQ9UBF8 816 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 MTMR6Q9Y217 621 aa21.62■■□□□ 1.05
SEC61A2-201ENST00000298428 COL2A1P02458 1487 aaPredicted RBP21.61■■□□□ 1.05
SEC61A2-201ENST00000298428 TCP10L2B9ZVM9 353 aa21.61■■□□□ 1.05
SEC61A2-201ENST00000298428 CLEC17AQ6ZS10 378 aa21.61■■□□□ 1.05
SEC61A2-201ENST00000298428 CRACR2BQ8N4Y2 399 aaPredicted RBP21.61■■□□□ 1.05
SEC61A2-201ENST00000298428 DPF2Q92785 391 aa21.61■■□□□ 1.05
SEC61A2-201ENST00000298428 ATRNL1Q5VV63 1379 aa21.61■■□□□ 1.05
SEC61A2-201ENST00000298428 SRCAPQ6ZRS2 3230 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 WNT10BO00744 389 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 DDAH1O94760 285 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 FANCBQ8NB91 859 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 SIPA1L1O43166 1804 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 DICER1Q9UPY3 1922 aaKnown RBP21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 CCDC196A0A1B0GTZ2 297 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 BAG4O95429 457 aaKnown RBP21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 CALM1P0DP23 149 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 CALM2P0DP24 149 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 CALM3P0DP25 149 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 FDPSP14324 419 aaKnown RBP21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 YBX3P16989 372 aaKnown RBP eCLIP21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 MCM4P33991 863 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 SHMT1P34896 483 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 MICALL2Q8IY33 904 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 ANKS1AQ92625 1134 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 KAT14Q9H8E8 782 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 VEZTQ9HBM0 779 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 MYH8P13535 1937 aa21.6■■□□□ 1.05
SEC61A2-201ENST00000298428 TROAPQ12815 778 aa21.59■■□□□ 1.05
SEC61A2-201ENST00000298428 PPP2R5BQ15173 497 aa21.59■■□□□ 1.05
SEC61A2-201ENST00000298428 NTRK3Q16288 839 aa21.59■■□□□ 1.05
SEC61A2-201ENST00000298428 NBPF9Q3BBW0 867 aa21.59■■□□□ 1.05
SEC61A2-201ENST00000298428 TRIM34Q9BYJ4 488 aa21.59■■□□□ 1.05
SEC61A2-201ENST00000298428 ORC3Q9UBD5 711 aaPredicted RBP21.59■■□□□ 1.05
SEC61A2-201ENST00000298428 TAOK2Q9UL54 1235 aa21.59■■□□□ 1.05
SEC61A2-201ENST00000298428 STX8Q9UNK0 236 aa21.59■■□□□ 1.05
SEC61A2-201ENST00000298428 PLIN4Q96Q06 1357 aa21.59■■□□□ 1.05
SEC61A2-201ENST00000298428 F13A1P00488 732 aa21.58■■□□□ 1.05
SEC61A2-201ENST00000298428 FKBP1CQ5VVH2 108 aa21.58■■□□□ 1.05
SEC61A2-201ENST00000298428 CDC37L1Q7L3B6 337 aa21.58■■□□□ 1.05
SEC61A2-201ENST00000298428 DNAJC18Q9H819 358 aa21.58■■□□□ 1.05
SEC61A2-201ENST00000298428 SBF1O95248 1867 aa21.58■■□□□ 1.05
SEC61A2-201ENST00000298428 H3BQV1 296 aa21.58■■□□□ 1.04
SEC61A2-201ENST00000298428 AKR1B1P15121 316 aa21.58■■□□□ 1.04
SEC61A2-201ENST00000298428 IFFO2Q5TF58 517 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms