RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 IFIT1BQ5T764 474 aaKnown RBP16.77■□□□□ 0.27
GDF9-201ENST00000296875 RESP18Q5W5W9 173 aa16.77■□□□□ 0.27
GDF9-201ENST00000296875 CCDC144CPQ8IYA2 1237 aa16.77■□□□□ 0.27
GDF9-201ENST00000296875 FAM84BQ96KN1 310 aaPredicted RBP16.77■□□□□ 0.27
GDF9-201ENST00000296875 ZSCAN10Q96SZ4 725 aaPredicted RBP16.77■□□□□ 0.27
GDF9-201ENST00000296875 DACH1Q9UI36 760 aa16.77■□□□□ 0.27
GDF9-201ENST00000296875 TNKSO95271 1327 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 UQCRHLA0A096LP55 91 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 SNAP23O00161 211 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 IKBKBO14920 756 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 RANBP6O60518 1105 aaKnown RBP16.76■□□□□ 0.27
GDF9-201ENST00000296875 UQCRHP07919 91 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 FGRP09769 529 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 RXRAP19793 462 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 GSTO1P78417 241 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 PDE4BQ07343 736 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
GDF9-201ENST00000296875 CCDC186Q7Z3E2 898 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 ZNF579Q8NAF0 562 aaKnown RBP16.76■□□□□ 0.27
GDF9-201ENST00000296875 ZNF830Q96NB3 372 aaPredicted RBP16.76■□□□□ 0.27
GDF9-201ENST00000296875 HPSEQ9Y251 543 aa16.76■□□□□ 0.27
GDF9-201ENST00000296875 ANKRD31Q8N7Z5 1873 aa16.75■□□□□ 0.27
GDF9-201ENST00000296875 POLRMTO00411 1230 aaKnown RBP16.75■□□□□ 0.27
GDF9-201ENST00000296875 ORC4O43929 436 aa16.75■□□□□ 0.27
GDF9-201ENST00000296875 PTGS1P23219 599 aa16.75■□□□□ 0.27
GDF9-201ENST00000296875 PTPAQ15257 358 aa16.75■□□□□ 0.27
GDF9-201ENST00000296875 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
GDF9-201ENST00000296875 DIS3L2Q8IYB7 885 aaKnown RBP16.75■□□□□ 0.27
GDF9-201ENST00000296875 NUP133Q8WUM0 1156 aa16.75■□□□□ 0.27
GDF9-201ENST00000296875 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
GDF9-201ENST00000296875 LEMD3Q9Y2U8 911 aa16.75■□□□□ 0.27
GDF9-201ENST00000296875 CBFA2T2O43439 604 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 SEC23AQ15436 765 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 PRR5LQ6MZQ0 368 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 CCDC24Q8N4L8 307 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 AOPEPQ8N6M6 819 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 WDR66Q8TBY9 1149 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 STK32BQ9NY57 414 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 DUOX1Q9NRD9 1551 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 PRPF3O43395 683 aaKnown RBP16.74■□□□□ 0.27
GDF9-201ENST00000296875 SERPINB2P05120 415 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 NLGN1Q8N2Q7 840 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 MYRIPQ8NFW9 859 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 CELF1Q92879 486 aaKnown RBP16.74■□□□□ 0.27
GDF9-201ENST00000296875 PYM1Q9BRP8 204 aaKnown RBP16.74■□□□□ 0.27
GDF9-201ENST00000296875 MYL10Q9BUA6 226 aa16.74■□□□□ 0.27
GDF9-201ENST00000296875 MARCKSP29966 332 aaPredicted RBP16.73■□□□□ 0.27
GDF9-201ENST00000296875 KIF5BP33176 963 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 CACNA1SQ13698 1873 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 R3HDM1Q15032 1099 aaKnown RBP16.73■□□□□ 0.27
GDF9-201ENST00000296875 NBPF11Q86T75 865 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
GDF9-201ENST00000296875 CNNM3Q8NE01 707 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 CTCFLQ8NI51 663 aaPredicted RBP16.73■□□□□ 0.27
GDF9-201ENST00000296875 SDR42E1Q8WUS8 393 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 NSUN4Q96CB9 384 aaKnown RBP16.73■□□□□ 0.27
GDF9-201ENST00000296875 KCNF1Q9H3M0 494 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 TUBE1Q9UJT0 475 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 KCNH3Q9ULD8 1083 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 IQSEC3Q9UPP2 1182 aaPredicted RBP16.73■□□□□ 0.27
GDF9-201ENST00000296875 MYH13Q9UKX3 1938 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
GDF9-201ENST00000296875 CNBD1Q8NA66 436 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 CCDC150Q8NCX0 1101 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 AIFM3Q96NN9 605 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
GDF9-201ENST00000296875 ZNF287Q9HBT7 754 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 BAG3O95817 575 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 LDHCP07864 332 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 KRT2P35908 639 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 HSP90AA2PQ14568 343 aaPredicted RBP16.72■□□□□ 0.27
GDF9-201ENST00000296875 CT47A1Q5JQC4 288 aaPredicted RBP16.72■□□□□ 0.27
GDF9-201ENST00000296875 FAM177A1Q8N128 213 aaPredicted RBP16.72■□□□□ 0.27
GDF9-201ENST00000296875 TRIML1Q8N9V2 468 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 ZKSCAN3Q9BRR0 538 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 GJB4Q9NTQ9 266 aa16.72■□□□□ 0.27
GDF9-201ENST00000296875 COL1A1P02452 1464 aaPredicted RBP16.71■□□□□ 0.27
GDF9-201ENST00000296875 KIF2AO00139 706 aaPredicted RBP16.71■□□□□ 0.27
GDF9-201ENST00000296875 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
GDF9-201ENST00000296875 MECOMQ03112 1051 aa16.71■□□□□ 0.27
GDF9-201ENST00000296875 CTR9Q6PD62 1173 aa16.71■□□□□ 0.27
GDF9-201ENST00000296875 ZNF804AQ7Z570 1209 aa16.71■□□□□ 0.27
GDF9-201ENST00000296875 ADGRA1Q86SQ6 560 aa16.71■□□□□ 0.27
GDF9-201ENST00000296875 ENAHQ8N8S7 591 aaPredicted RBP16.71■□□□□ 0.27
GDF9-201ENST00000296875 INCENPQ9NQS7 918 aa16.71■□□□□ 0.27
GDF9-201ENST00000296875 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
GDF9-201ENST00000296875 BTBD18B2RXH4 712 aa16.7■□□□□ 0.26
GDF9-201ENST00000296875 PTPREP23469 700 aa16.7■□□□□ 0.26
GDF9-201ENST00000296875 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.26
GDF9-201ENST00000296875 GRAPQ13588 217 aa16.7■□□□□ 0.26
GDF9-201ENST00000296875 SHC4Q6S5L8 630 aa16.7■□□□□ 0.26
GDF9-201ENST00000296875 KRBA2Q6ZNG9 492 aa16.7■□□□□ 0.26
GDF9-201ENST00000296875 GRAPLQ8TC17 118 aaPredicted RBP16.7■□□□□ 0.26
GDF9-201ENST00000296875 FERMT2Q96AC1 680 aa16.7■□□□□ 0.26
GDF9-201ENST00000296875 PAXBP1Q9Y5B6 917 aa16.7■□□□□ 0.26
GDF9-201ENST00000296875 CCDC88AQ3V6T2 1871 aa16.7■□□□□ 0.26
GDF9-201ENST00000296875 LAMB1P07942 1786 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms