RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 UBXN1Q04323 297 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 EFCAB13Q8IY85 973 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 SH2D3CQ8N5H7 860 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 HELLSQ9NRZ9 838 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 GPAA1O43292 621 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 KIRREL3Q8IZU9 778 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 OTUD6BQ8N6M0 293 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 CXorf56Q9H5V9 222 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 SLC12A7Q9Y666 1083 aa11.7□□□□□ -0.54
ARHGEF3-201ENST00000296315 FAM205CA6NFA0 338 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 ATP1A1P05023 1023 aaKnown RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 ANTXR2P58335 489 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 CYP27A1Q02318 531 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 ACTN3Q08043 901 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 SSRP1Q08945 709 aaKnown RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 ENOX2Q16206 610 aaKnown RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 OVOS2A0A0J9YW53 1432 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 OVOS2Q6IE36 1432 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 CDKL5O76039 1030 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 RESP18Q5W5W9 173 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 ANKRD18AQ8IVF6 992 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 MLKLQ8NB16 471 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 CSRNP2Q9H175 543 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 COPRSQ9NQ92 184 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 NRKQ7Z2Y5 1582 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 RNF225M0QZC1 329 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 BACH1O14867 736 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 MYBL2P10244 700 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 HNRNPH1P31943 449 aaKnown RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 EIF5P55010 431 aaKnown RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 CCDC70Q6NSX1 233 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 GBP6Q6ZN66 633 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 THEMISQ8N1K5 641 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 ANKRD13CQ8N6S4 541 aa11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 METTL22Q9BUU2 404 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 GEMIN8Q9NWZ8 242 aaKnown RBP11.69□□□□□ -0.54
ARHGEF3-201ENST00000296315 MFAP3LO75121 409 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 SCARF1Q14162 830 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 ZNF174Q15697 407 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 EZH2Q15910 746 aaKnown RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 CAPS2Q9BXY5 557 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 CD248Q9HCU0 757 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 ANGEL1Q9UNK9 670 aaKnown RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 TULP1O00294 542 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 PRDM1O75626 825 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 CD44P16070 742 aaKnown RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 ERVK-24P63145 666 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 TEX2Q8IWB9 1127 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 TRIM22Q8IYM9 498 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 SMCR8Q8TEV9 937 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 ANKRD24Q8TF21 1146 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 IFT81Q8WYA0 676 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 RRP36Q96EU6 259 aaKnown RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 BCCIPQ9P287 314 aaKnown RBP eCLIP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 WWC3Q9ULE0 1092 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 SYF2O95926 243 aaKnown RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 HOXB7P09629 217 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 IDEP14735 1019 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 HPDP32754 393 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 TBX2Q13207 712 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 CNGA4Q8IV77 575 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 OXER1Q8TDS5 423 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 RAPGEF4Q8WZA2 1011 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 SELENOOQ9BVL4 669 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 MED4Q9NPJ6 270 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 EHD2Q9NZN4 543 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 TTF2Q9UNY4 1162 aaKnown RBP11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 SAR1BQ9Y6B6 198 aa11.68□□□□□ -0.54
ARHGEF3-201ENST00000296315 GYPCP04921 128 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 NR1I3Q14994 352 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 PTPROQ16827 1216 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 SCLT1Q96NL6 688 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 MED15Q96RN5 788 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 PTPAQ15257 358 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 CCDC57Q2TAC2 916 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 CCDC181Q5TID7 509 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 ENOX1Q8TC92 643 aaKnown RBP11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 JAKMIP2Q96AA8 810 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 HPCAL4Q9UM19 191 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 TMEM2Q9UHN6 1383 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 DLC1Q96QB1 1528 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 IRAK1P51617 712 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 E2F5Q15329 346 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 WHAMMP3Q1A5X7 153 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 ZNF790Q6PG37 636 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 APOA5Q6Q788 366 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 VPS54Q9P1Q0 977 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 EPN1Q9Y6I3 576 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 DUSP10Q9Y6W6 482 aa11.67□□□□□ -0.54
ARHGEF3-201ENST00000296315 PLCD1P51178 756 aa11.66□□□□□ -0.54
ARHGEF3-201ENST00000296315 NOSTRINQ8IVI9 506 aa11.66□□□□□ -0.54
ARHGEF3-201ENST00000296315 MSANTD4Q8NCY6 345 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms