RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 POLR3EQ9NVU0 708 aa10.75□□□□□ -0.69
CLRN1-201ENST00000295911 MINDY4BA8MYZ0 360 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 NR1I2O75469 434 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 FGRP09769 529 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 IFNAR1P17181 557 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 MSNP26038 577 aaKnown RBP10.74□□□□□ -0.69
CLRN1-201ENST00000295911 ME1P48163 572 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 ST5P78524 1137 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 CEBPZQ03701 1054 aaKnown RBP10.74□□□□□ -0.69
CLRN1-201ENST00000295911 TYRO3Q06418 890 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 STK38Q15208 465 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 NTRK3Q16288 839 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 RTN1Q16799 776 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 RRP12Q5JTH9 1297 aaKnown RBP10.74□□□□□ -0.69
CLRN1-201ENST00000295911 ADALQ6DHV7 355 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 SASS6Q6UVJ0 657 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 ADGRA1Q86SQ6 560 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 MICU3Q86XE3 530 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 TRIM22Q8IYM9 498 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 RPGRQ92834 1020 aaKnown RBP10.74□□□□□ -0.69
CLRN1-201ENST00000295911 ATP8A2Q9NTI2 1148 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 ANKIB1Q9P2G1 1089 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 XDHP47989 1333 aa10.74□□□□□ -0.69
CLRN1-201ENST00000295911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.73□□□□□ -0.69
CLRN1-201ENST00000295911 KINO60870 393 aaKnown RBP10.73□□□□□ -0.69
CLRN1-201ENST00000295911 FMNL1O95466 1100 aaPredicted RBP10.73□□□□□ -0.69
CLRN1-201ENST00000295911 CALM1P0DP23 149 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 CALM2P0DP24 149 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 CALM3P0DP25 149 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 CDC27P30260 824 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 GSTO1P78417 241 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 KIF23Q02241 960 aaPredicted RBP10.73□□□□□ -0.69
CLRN1-201ENST00000295911 MECOMQ03112 1051 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 FAM160A1Q05DH4 1040 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 GNL2Q13823 731 aaKnown RBP10.73□□□□□ -0.69
CLRN1-201ENST00000295911 SF3A1Q15459 793 aaKnown RBP10.73□□□□□ -0.69
CLRN1-201ENST00000295911 SBK1Q52WX2 424 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 ZNF804AQ7Z570 1209 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 AMIGO3Q86WK7 504 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 IQCA1Q86XH1 822 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 CERS3Q8IU89 383 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 LINC00301Q8NCQ3 95 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 SDR42E1Q8WUS8 393 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 RBM17Q96I25 401 aaKnown RBP10.73□□□□□ -0.69
CLRN1-201ENST00000295911 INCENPQ9NQS7 918 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 LRRC4BQ9NT99 713 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 FAM217BQ9NTX9 383 aaPredicted RBP10.73□□□□□ -0.69
CLRN1-201ENST00000295911 TFCP2L1Q9NZI6 479 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 IRS2Q9Y4H2 1338 aa10.73□□□□□ -0.69
CLRN1-201ENST00000295911 WTIPA6NIX2 430 aaPredicted RBP10.72□□□□□ -0.69
CLRN1-201ENST00000295911 SPTLC2O15270 562 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 BBOX1O75936 387 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 ATP2B4P23634 1241 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 SAFBQ15424 915 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLRN1-201ENST00000295911 CAMK4Q16566 473 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 ANO1Q5XXA6 986 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 KRT40Q6A162 431 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 KRT27Q7Z3Y8 459 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 RAB11FIP4Q86YS3 637 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 JMYQ8N9B5 988 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 FANCBQ8NB91 859 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 MRPS27Q92552 414 aaKnown RBP10.72□□□□□ -0.69
CLRN1-201ENST00000295911 SENP2Q9HC62 589 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 NOL7Q9UMY1 257 aaKnown RBP10.72□□□□□ -0.69
CLRN1-201ENST00000295911 TACC3Q9Y6A5 838 aa10.72□□□□□ -0.69
CLRN1-201ENST00000295911 CDK5RAP2Q96SN8 1893 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 ORC4O43929 436 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 PPFIA3O75145 1194 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 DEXIO95424 95 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 SERPINB2P05120 415 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 POLR3DP05423 398 aaPredicted RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 PTMAP06454 111 aaKnown RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 LDHBP07195 334 aaKnown RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 LDHCP07864 332 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 GYS1P13807 737 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 U2AF2P26368 475 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 KLRK1P26718 216 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 DYNLL1P63167 89 aaKnown RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 CHAF1AQ13111 956 aaPredicted RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 SEC23AQ15436 765 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 CRY2Q49AN0 593 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 OTUD7BQ6GQQ9 843 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 PRR5LQ6MZQ0 368 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 CTR9Q6PD62 1173 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 ADGRD1Q6QNK2 874 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 TMC4Q7Z404 712 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 CATIPQ7Z7H3 387 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 DZIP1Q86YF9 867 aaKnown RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 ZNF654Q8IZM8 581 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 CCDC24Q8N4L8 307 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 FSIP1Q8NA03 581 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 ENGASEQ8NFI3 743 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 TDRD7Q8NHU6 1098 aaKnown RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 NKX2-3Q8TAU0 364 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 ZSCAN10Q96SZ4 725 aaPredicted RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 NOL10Q9BSC4 688 aaKnown RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 SLC26A6Q9BXS9 759 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 EMILIN3Q9NT22 766 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms