RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 BPIFA3Q9BQP9 254 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 CRNKL1Q9BZJ0 848 aaKnown RBP5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 INCENPQ9NQS7 918 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 IFNKQ9P0W0 207 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 SPATA31A5Q5VU36 1347 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 SPATA31A7Q8IWB4 1347 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 TIAM2Q8IVF5 1701 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 MYO5AQ9Y4I1 1855 aaKnown RBP5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 KIF2AO00139 706 aaPredicted RBP5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 ZPR1O75312 459 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 MMP1P03956 469 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 CALM1P0DP23 149 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 CALM2P0DP24 149 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 CALM3P0DP25 149 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 MYL5Q02045 173 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 ISM2Q6H9L7 571 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 NBPF5PQ86XG9 351 aaPredicted RBP5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 CTCFLQ8NI51 663 aaPredicted RBP5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 NLRP3Q96P20 1036 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 NOL10Q9BSC4 688 aaKnown RBP5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 IMPACTQ9P2X3 320 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 KCNH3Q9ULD8 1083 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 KCNJ14Q9UNX9 436 aa5.57□□□□□ -1.52
PPP1R9A-201ENST00000289495 SEMA3EO15041 775 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 PHLPP1O60346 1717 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 U2AF2P26368 475 aaKnown RBP eCLIP5.56□□□□□ -1.521e-6■■■□□ 14.9
PPP1R9A-201ENST00000289495 LMOD1P29536 600 aaPredicted RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 PTPN14Q15678 1187 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 CCDC144BQ3MJ40 725 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 CFAP100Q494V2 611 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 AXDND1Q5T1B0 1012 aaPredicted RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 MEX3CQ5U5Q3 659 aaKnown RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 LRRC8AQ8IWT6 810 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 SETDB2Q96T68 719 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 ANKRD2Q9GZV1 360 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 FOXP1Q9H334 677 aaPredicted RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 OCEL1Q9H607 264 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 RBM28Q9NW13 759 aaKnown RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 DOCK2Q92608 1830 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 BTBD18B2RXH4 712 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 WDHD1O75717 1129 aaPredicted RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 BMP15O95972 392 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 PCP11498 1178 aaKnown RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 NTRK3Q16288 839 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 FAM98CQ17RN3 349 aaKnown RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 RESP18Q5W5W9 173 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 BARGINQ6ZT62 677 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 DZIP1Q86YF9 867 aaKnown RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 FANCBQ8NB91 859 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 BBXQ8WY36 941 aaPredicted RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 CLIC6Q96NY7 704 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 RNF26Q9BY78 433 aaPredicted RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 BSDC1Q9NW68 430 aaPredicted RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 PAXBP1Q9Y5B6 917 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 LAMB2P55268 1798 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 TRIM75PA6NK02 468 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 IKBKBO14920 756 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 CCP110O43303 1012 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 CDK11BP21127 795 aaKnown RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 KRT2P35908 639 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 PNOCQ13519 176 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 CEP135Q66GS9 1140 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 KANK3Q6NY19 840 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 KRBA2Q6ZNG9 492 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 UPF1Q92900 1129 aaKnown RBP eCLIP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 SMARCE1Q969G3 411 aa5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 XPO4Q9C0E2 1151 aaKnown RBP5.56□□□□□ -1.52
PPP1R9A-201ENST00000289495 DDX60Q8IY21 1712 aaKnown RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 FANCCQ00597 558 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 SF3B3Q15393 1217 aaKnown RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 SHC4Q6S5L8 630 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 MICALL2Q8IY33 904 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 CRACR2BQ8N4Y2 399 aaPredicted RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 ZSCAN10Q96SZ4 725 aaPredicted RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 BRIP1Q9BX63 1249 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 SLIT2O94813 1529 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 NID2Q14112 1375 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 ZNF804BA4D1E1 1349 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 GNPATO15228 680 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 MYO1BO43795 1136 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 HIBADHP31937 336 aaKnown RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 GTF2F1P35269 517 aaKnown RBP eCLIP5.55□□□□□ -1.527e-8■■■■■ 33.4
PPP1R9A-201ENST00000289495 UBASH3AP57075 661 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 PDE4BQ07343 736 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 PTPAQ15257 358 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 SPTY2D1Q68D10 685 aaPredicted RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 CMTR1Q8N1G2 835 aaKnown RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 PDILTQ8N807 584 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 NGLY1Q96IV0 654 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 TRMT1Q9NXH9 659 aaKnown RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 CNTNAP4Q9C0A0 1308 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 TSPY2A6NKD2 308 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 KCNQ2O43526 872 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 PRDM1O75626 825 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 DDAH1O94760 285 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 TOP1P11387 765 aaKnown RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 RPS8P62241 208 aaKnown RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 DYNLL1P63167 89 aaKnown RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 POSTNQ15063 836 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms