RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 MAGEB6P1A0A0J9YX57 407 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 SMARCA5O60264 1052 aaPredicted RBP11.59□□□□□ -0.55
HMHB1-201ENST00000289448 PEX10O60683 326 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 CHGBP05060 677 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 HLA-DOAP06340 250 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 GRK4P32298 578 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 PLCD1P51178 756 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 BACE1P56817 501 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 TTF1Q15361 905 aaPredicted RBP11.59□□□□□ -0.55
HMHB1-201ENST00000289448 TATDN1Q6P1N9 297 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
HMHB1-201ENST00000289448 TBC1D2Q9BYX2 928 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 ASCC2Q9H1I8 757 aaPredicted RBP11.59□□□□□ -0.55
HMHB1-201ENST00000289448 BOLA2Q9H3K6 86 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 ZNF532Q9HCE3 1301 aa11.59□□□□□ -0.55
HMHB1-201ENST00000289448 GH2P01242 217 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 ATP5JP18859 108 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 FLT3LGP49771 235 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 FAM110CQ1W6H9 321 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 TMED8Q6PL24 325 aaPredicted RBP11.58□□□□□ -0.56
HMHB1-201ENST00000289448 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 TRIM34Q9BYJ4 488 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 CHMP4BQ9H444 224 aaKnown RBP11.58□□□□□ -0.56
HMHB1-201ENST00000289448 SERPINB13Q9UIV8 391 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 PNMA3Q9UL41 463 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 LOC285556D6RIA3 1793 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 RBBP6Q7Z6E9 1792 aaKnown RBP11.58□□□□□ -0.56
HMHB1-201ENST00000289448 ATAD5Q96QE3 1844 aa11.58□□□□□ -0.56
HMHB1-201ENST00000289448 DOCK3Q8IZD9 2030 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 USP17L10C9JJH3 530 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 TNPO2O14787 897 aaKnown RBP11.57□□□□□ -0.56
HMHB1-201ENST00000289448 ELNP15502 786 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 HOXA7P31268 230 aaPredicted RBP11.57□□□□□ -0.56
HMHB1-201ENST00000289448 SHMT1P34896 483 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 CERS3Q8IU89 383 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 LCORLQ8N3X6 602 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 SDR42E1Q8WUS8 393 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 SHISA4Q96DD7 197 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 P2RX7Q99572 595 aaKnown RBP11.57□□□□□ -0.56
HMHB1-201ENST00000289448 HAUS7Q99871 368 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 EHD4Q9H223 541 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 TXNRD2Q9NNW7 524 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 EMILIN3Q9NT22 766 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 GINM1Q9NU53 330 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 PAG1Q9NWQ8 432 aa11.57□□□□□ -0.56
HMHB1-201ENST00000289448 C19orf81C9J6K1 198 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 PRKAB2O43741 272 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 ADCY3O60266 1144 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 CYP2D6P10635 497 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 CCL5P13501 91 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 GUCY1A2P33402 732 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 GCLCP48506 637 aaPredicted RBP11.56□□□□□ -0.56
HMHB1-201ENST00000289448 GABPAQ06546 454 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 PABPC4Q13310 644 aaKnown RBP eCLIP11.56□□□□□ -0.56
HMHB1-201ENST00000289448 TTC6Q86TZ1 520 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 SLAIN1Q8ND83 568 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 ACER1Q8TDN7 264 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 CRNKL1Q9BZJ0 848 aaKnown RBP11.56□□□□□ -0.56
HMHB1-201ENST00000289448 LRRCC1Q9C099 1032 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 ARMT1Q9H993 441 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 TMOD4Q9NZQ9 345 aa11.56□□□□□ -0.56
HMHB1-201ENST00000289448 MGAMO43451 1857 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 MYH1P12882 1939 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 SMIM22K7EJ46 135 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 SLC34A2O95436 690 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 POLR3DP05423 398 aaPredicted RBP11.55□□□□□ -0.56
HMHB1-201ENST00000289448 ADD2P35612 726 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 IRX3P78415 501 aaPredicted RBP11.55□□□□□ -0.56
HMHB1-201ENST00000289448 IRF5Q13568 498 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 ZYXQ15942 572 aaKnown RBP11.55□□□□□ -0.56
HMHB1-201ENST00000289448 CERKLQ49MI3 558 aaPredicted RBP11.55□□□□□ -0.56
HMHB1-201ENST00000289448 RNF208Q9H0X6 261 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 UNC93B1Q9H1C4 597 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 DCP1AQ9NPI6 582 aaPredicted RBP11.55□□□□□ -0.56
HMHB1-201ENST00000289448 MCM9Q9NXL9 1143 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 RBPJLQ9UBG7 517 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 MORF4L1Q9UBU8 362 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 BIN2Q9UBW5 565 aaPredicted RBP11.55□□□□□ -0.56
HMHB1-201ENST00000289448 GJD2Q9UKL4 321 aa11.55□□□□□ -0.56
HMHB1-201ENST00000289448 MBD4O95243 580 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 INHAP05111 366 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 GJB1P08034 283 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 GJA8P48165 433 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 HERVK_113P62684 666 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 RAB3GAP1Q15042 981 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 ABCB5Q2M3G0 1257 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 Q3C1V9 767 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 USP17L2Q6R6M4 530 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 SLC44A5Q8NCS7 719 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 PXYLP1Q8TE99 480 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 COA7Q96BR5 231 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 PCDHB15Q9Y5E8 787 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 DDX60LQ5H9U9 1706 aaKnown RBP11.54□□□□□ -0.56
HMHB1-201ENST00000289448 TRIOBPQ9H2D6 2365 aa11.54□□□□□ -0.56
HMHB1-201ENST00000289448 UBXN2AP68543 259 aa11.53□□□□□ -0.56
HMHB1-201ENST00000289448 SEPT2Q15019 361 aa11.53□□□□□ -0.56
HMHB1-201ENST00000289448 TSHZ3Q63HK5 1081 aa11.53□□□□□ -0.56
HMHB1-201ENST00000289448 UBE2Q1Q7Z7E8 422 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms