RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 CDCA5Q96FF9 252 aa25.77■■□□□ 1.72
PDLIM3-203ENST00000284771 RPS6KB1P23443 525 aa25.76■■□□□ 1.71
PDLIM3-203ENST00000284771 NEK4P51957 841 aa25.76■■□□□ 1.71
PDLIM3-203ENST00000284771 TFAP4Q01664 338 aa25.76■■□□□ 1.71
PDLIM3-203ENST00000284771 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.76■■□□□ 1.71
PDLIM3-203ENST00000284771 ZNF287Q9HBT7 754 aa25.76■■□□□ 1.71
PDLIM3-203ENST00000284771 AKR1B1P15121 316 aa25.75■■□□□ 1.71
PDLIM3-203ENST00000284771 YY1P25490 414 aa25.75■■□□□ 1.71
PDLIM3-203ENST00000284771 SUPT20HL1Q3ZLR7 823 aa25.75■■□□□ 1.71
PDLIM3-203ENST00000284771 TRIM34Q9BYJ4 488 aa25.75■■□□□ 1.71
PDLIM3-203ENST00000284771 LRRC2Q9BYS8 371 aa25.75■■□□□ 1.71
PDLIM3-203ENST00000284771 TAOK2Q9UL54 1235 aa25.75■■□□□ 1.71
PDLIM3-203ENST00000284771 CYP46A1Q9Y6A2 500 aa25.75■■□□□ 1.71
PDLIM3-203ENST00000284771 NMT2O60551 498 aa25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 HMGB1P09429 215 aaKnown RBP25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 MCM5P33992 734 aa25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 RABEP1Q15276 862 aa25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 CERKLQ49MI3 558 aaPredicted RBP25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 TTC14Q96N46 770 aa25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 ZKSCAN3Q9BRR0 538 aa25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 IL17RBQ9NRM6 502 aa25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 ITGBL1O95965 494 aaPredicted RBP25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 GPHNQ9NQX3 736 aaPredicted RBP25.74■■□□□ 1.71
PDLIM3-203ENST00000284771 TSPY2A6NKD2 308 aa25.73■■□□□ 1.71
PDLIM3-203ENST00000284771 PRC1O43663 620 aa25.73■■□□□ 1.71
PDLIM3-203ENST00000284771 GDF11O95390 407 aa25.73■■□□□ 1.71
PDLIM3-203ENST00000284771 CHADLQ6NUI6 762 aa25.73■■□□□ 1.71
PDLIM3-203ENST00000284771 USP2O75604 605 aaPredicted RBP25.72■■□□□ 1.71
PDLIM3-203ENST00000284771 CD2BP2O95400 341 aaKnown RBP25.72■■□□□ 1.71
PDLIM3-203ENST00000284771 PRKG1Q13976 671 aa25.72■■□□□ 1.71
PDLIM3-203ENST00000284771 ZNF784Q8NCA9 323 aaPredicted RBP25.72■■□□□ 1.71
PDLIM3-203ENST00000284771 NEDD1Q8NHV4 660 aa25.72■■□□□ 1.71
PDLIM3-203ENST00000284771 IGDCC4Q8TDY8 1250 aa25.72■■□□□ 1.71
PDLIM3-203ENST00000284771 ZNF112Q9UJU3 913 aa25.72■■□□□ 1.71
PDLIM3-203ENST00000284771 TSPY3P0CV98 308 aa25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 TSPY8P0CW00 308 aa25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 DCAF15Q66K64 600 aa25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 KLRG1Q96E93 195 aa25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 HOOK2Q96ED9 719 aa25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 GREB1LQ9C091 1923 aaPredicted RBP25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 GUCY1A2P33402 732 aa25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 CCDC17Q96LX7 622 aa25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 SENP2Q9HC62 589 aa25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 PDRG1Q9NUG6 133 aa25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 RBM19Q9Y4C8 960 aaKnown RBP25.71■■□□□ 1.71
PDLIM3-203ENST00000284771 INPP5BP32019 993 aa25.7■■□□□ 1.7
PDLIM3-203ENST00000284771 CAP2P40123 477 aa25.7■■□□□ 1.7
PDLIM3-203ENST00000284771 TOB2Q14106 344 aaPredicted RBP25.7■■□□□ 1.7
PDLIM3-203ENST00000284771 Q6ZUG5 572 aa25.7■■□□□ 1.7
PDLIM3-203ENST00000284771 ZNF341Q9BYN7 854 aa25.7■■□□□ 1.7
PDLIM3-203ENST00000284771 IGKV6D-41A0A0C4DH26 115 aa25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 ABCB5Q2M3G0 1257 aa25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 MOB2Q70IA6 237 aa25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 CLEC10AQ8IUN9 316 aa25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 ZSCAN10Q96SZ4 725 aaPredicted RBP25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 AGXT2Q9BYV1 514 aa25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 TCP11L1Q9NUJ3 509 aa25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 WDR19Q8NEZ3 1342 aa25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 PLIN4Q96Q06 1357 aa25.69■■□□□ 1.7
PDLIM3-203ENST00000284771 MPHOSPH10O00566 681 aaKnown RBP25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 GH2P01242 217 aa25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 NT5C2P49902 561 aa25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 SEC23AQ15436 765 aa25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 RCSD1Q6JBY9 416 aa25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 LARP6Q9BRS8 491 aaKnown RBP25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 AK2P54819 239 aa25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 IQCA1Q86XH1 822 aa25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 FBXL16Q8N461 479 aa25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 ENAHQ8N8S7 591 aaPredicted RBP25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 ZKSCAN4Q969J2 545 aaPredicted RBP25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 CEP95Q96GE4 821 aa25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 WRNIP1Q96S55 665 aa25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 ALDH8A1Q9H2A2 487 aaPredicted RBP25.68■■□□□ 1.7
PDLIM3-203ENST00000284771 TNKSO95271 1327 aa25.67■■□□□ 1.7
PDLIM3-203ENST00000284771 SH2B2O14492 632 aaPredicted RBP25.67■■□□□ 1.7
PDLIM3-203ENST00000284771 IFIT3O14879 490 aaKnown RBP25.67■■□□□ 1.7
PDLIM3-203ENST00000284771 SEPT2Q15019 361 aa25.67■■□□□ 1.7
PDLIM3-203ENST00000284771 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.67■■□□□ 1.7
PDLIM3-203ENST00000284771 TMEM87BQ96K49 555 aa25.67■■□□□ 1.7
PDLIM3-203ENST00000284771 LY9Q9HBG7 655 aa25.67■■□□□ 1.7
PDLIM3-203ENST00000284771 PPP1R12BO60237 982 aaPredicted RBP25.66■■□□□ 1.7
PDLIM3-203ENST00000284771 CTNND1O60716 968 aaKnown RBP25.66■■□□□ 1.7
PDLIM3-203ENST00000284771 NOVP48745 357 aa25.66■■□□□ 1.7
PDLIM3-203ENST00000284771 SIAH1Q8IUQ4 282 aa25.66■■□□□ 1.7
PDLIM3-203ENST00000284771 UBAC1Q9BSL1 405 aa25.66■■□□□ 1.7
PDLIM3-203ENST00000284771 MTA3Q9BTC8 594 aa25.66■■□□□ 1.7
PDLIM3-203ENST00000284771 MTMR4Q9NYA4 1195 aa25.66■■□□□ 1.7
PDLIM3-203ENST00000284771 NF2P35240 595 aa25.65■■□□□ 1.7
PDLIM3-203ENST00000284771 TMEM67Q5HYA8 995 aa25.65■■□□□ 1.7
PDLIM3-203ENST00000284771 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.65■■□□□ 1.7
PDLIM3-203ENST00000284771 BRF1Q92994 677 aa25.65■■□□□ 1.7
PDLIM3-203ENST00000284771 ZNF408Q9H9D4 720 aa25.65■■□□□ 1.7
PDLIM3-203ENST00000284771 ZBTB21Q9ULJ3 1066 aa25.65■■□□□ 1.7
PDLIM3-203ENST00000284771 ANGEL1Q9UNK9 670 aaKnown RBP25.65■■□□□ 1.7
PDLIM3-203ENST00000284771 PAPPA2Q9BXP8 1791 aa25.65■■□□□ 1.7
PDLIM3-203ENST00000284771 ATAD5Q96QE3 1844 aa25.65■■□□□ 1.7
PDLIM3-203ENST00000284771 MAP3K11Q16584 847 aa25.64■■□□□ 1.7
PDLIM3-203ENST00000284771 CST9Q5W186 159 aa25.64■■□□□ 1.7
PDLIM3-203ENST00000284771 TMEM179Q6ZVK1 233 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms