RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 USP17L3A6NCW0 530 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 USP17L4A6NCW7 530 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 ISM2Q6H9L7 571 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 USP17L1Q7RTZ2 530 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 KCNG4Q8TDN1 519 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 POLR3EQ9NVU0 708 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 PARP3Q9Y6F1 533 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 MYH15Q9Y2K3 1946 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 G3V3G9 751 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 BIN1O00499 593 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 DCAF8Q5TAQ9 597 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 ATL3Q6DD88 541 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 NBPF11Q86T75 865 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 PICALMQ13492 652 aa20.74■□□□□ 0.91
CAPN1-201ENST00000279247 ADALQ6DHV7 355 aa20.74■□□□□ 0.91
CAPN1-201ENST00000279247 CBX8Q9HC52 389 aa20.74■□□□□ 0.91
CAPN1-201ENST00000279247 TEX11Q8IYF3 940 aa20.74■□□□□ 0.91
CAPN1-201ENST00000279247 FAM200AQ8TCP9 573 aa20.74■□□□□ 0.91
CAPN1-201ENST00000279247 STK32BQ9NY57 414 aa20.74■□□□□ 0.91
CAPN1-201ENST00000279247 STX8Q9UNK0 236 aa20.74■□□□□ 0.91
CAPN1-201ENST00000279247 FAM205CA6NFA0 338 aa20.73■□□□□ 0.91
CAPN1-201ENST00000279247 DEXIO95424 95 aa20.73■□□□□ 0.91
CAPN1-201ENST00000279247 CHRNA5P30532 468 aa20.73■□□□□ 0.91
CAPN1-201ENST00000279247 ZNF165P49910 485 aa20.73■□□□□ 0.91
CAPN1-201ENST00000279247 WASF1Q92558 559 aa20.73■□□□□ 0.91
CAPN1-201ENST00000279247 CCDC88AQ3V6T2 1871 aa20.73■□□□□ 0.91
CAPN1-201ENST00000279247 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
CAPN1-201ENST00000279247 PDS5AQ29RF7 1337 aaKnown RBP20.73■□□□□ 0.91
CAPN1-201ENST00000279247 ZSCAN30Q86W11 494 aa20.73■□□□□ 0.91
CAPN1-201ENST00000279247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.73■□□□□ 0.91
CAPN1-201ENST00000279247 YEATS4O95619 227 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 MMP1P03956 469 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 GSTO1P78417 241 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 CTCFLQ8NI51 663 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-201ENST00000279247 MROH7-TTC4A0A0A0MT08 1334 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 SCNN1DP51172 638 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 TROAPQ12815 778 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 NOSTRINQ8IVI9 506 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 ENGASEQ8NFI3 743 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 ZC3H12CQ9C0D7 883 aaKnown RBP20.72■□□□□ 0.91
CAPN1-201ENST00000279247 CABP5Q9NP86 173 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 DUOX1Q9NRD9 1551 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 C12orf60Q5U649 245 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 C11orf57Q6ZUT1 292 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-201ENST00000279247 AMOTL1Q8IY63 956 aa20.72■□□□□ 0.91
CAPN1-201ENST00000279247 LDHCP07864 332 aa20.71■□□□□ 0.91
CAPN1-201ENST00000279247 VEGFAP15692 232 aaPredicted RBP20.71■□□□□ 0.91
CAPN1-201ENST00000279247 UVSSAQ2YD98 709 aa20.71■□□□□ 0.91
CAPN1-201ENST00000279247 RASGRP2Q7LDG7 609 aa20.71■□□□□ 0.91
CAPN1-201ENST00000279247 RTFDC1Q9BY42 306 aaPredicted RBP20.71■□□□□ 0.91
CAPN1-201ENST00000279247 TNS1Q9HBL0 1735 aaKnown RBP20.71■□□□□ 0.91
CAPN1-201ENST00000279247 TSPY3P0CV98 308 aa20.71■□□□□ 0.91
CAPN1-201ENST00000279247 TSPY8P0CW00 308 aa20.71■□□□□ 0.91
CAPN1-201ENST00000279247 PFKFB1P16118 471 aa20.71■□□□□ 0.91
CAPN1-201ENST00000279247 BAG6P46379 1132 aa20.71■□□□□ 0.91
CAPN1-201ENST00000279247 SLC39A14Q15043 492 aa20.71■□□□□ 0.91
CAPN1-201ENST00000279247 FMR1NBQ8N0W7 255 aaPredicted RBP20.71■□□□□ 0.91
CAPN1-201ENST00000279247 SRGNP10124 158 aa20.7■□□□□ 0.9
CAPN1-201ENST00000279247 HOXA10P31260 410 aaPredicted RBP20.7■□□□□ 0.9
CAPN1-201ENST00000279247 DPP8Q6V1X1 898 aaPredicted RBP20.7■□□□□ 0.9
CAPN1-201ENST00000279247 SHISA4Q96DD7 197 aa20.7■□□□□ 0.9
CAPN1-201ENST00000279247 CRAMP1Q96RY5 1269 aa20.7■□□□□ 0.9
CAPN1-201ENST00000279247 ZNF444Q8N0Y2 327 aaPredicted RBP20.7■□□□□ 0.9
CAPN1-201ENST00000279247 STK36Q9NRP7 1315 aa20.7■□□□□ 0.9
CAPN1-201ENST00000279247 ZNF202O95125 648 aa20.7■□□□□ 0.9
CAPN1-201ENST00000279247 U2AF2P26368 475 aaKnown RBP eCLIP20.7■□□□□ 0.9
CAPN1-201ENST00000279247 NOM1Q5C9Z4 860 aaKnown RBP20.7■□□□□ 0.9
CAPN1-201ENST00000279247 AXDND1Q5T1B0 1012 aaPredicted RBP20.7■□□□□ 0.9
CAPN1-201ENST00000279247 SRBD1Q8N5C6 995 aaKnown RBP20.7■□□□□ 0.9
CAPN1-201ENST00000279247 TTC12Q9H892 705 aaPredicted RBP20.7■□□□□ 0.9
CAPN1-201ENST00000279247 KAT14Q9H8E8 782 aa20.7■□□□□ 0.9
CAPN1-201ENST00000279247 DBNDD1Q9H9R9 158 aa20.7■□□□□ 0.9
CAPN1-201ENST00000279247 GRIN1Q05586 938 aa20.69■□□□□ 0.9
CAPN1-201ENST00000279247 CPVLQ9H3G5 476 aa20.69■□□□□ 0.9
CAPN1-201ENST00000279247 PCDHB6Q9Y5E3 794 aa20.69■□□□□ 0.9
CAPN1-201ENST00000279247 ORC4O43929 436 aa20.69■□□□□ 0.9
CAPN1-201ENST00000279247 ZRSR1Q15695 479 aaKnown RBP20.69■□□□□ 0.9
CAPN1-201ENST00000279247 KCNQ5Q9NR82 932 aa20.69■□□□□ 0.9
CAPN1-201ENST00000279247 IL17RBQ9NRM6 502 aa20.69■□□□□ 0.9
CAPN1-201ENST00000279247 IL1R1P14778 569 aa20.68■□□□□ 0.9
CAPN1-201ENST00000279247 PKN1Q16512 942 aa20.68■□□□□ 0.9
CAPN1-201ENST00000279247 CCDC39Q9UFE4 941 aa20.68■□□□□ 0.9
CAPN1-201ENST00000279247 GOLGA8HP0CJ92 632 aa20.68■□□□□ 0.9
CAPN1-201ENST00000279247 TOB1P50616 345 aaPredicted RBP20.68■□□□□ 0.9
CAPN1-201ENST00000279247 SBK1Q52WX2 424 aa20.68■□□□□ 0.9
CAPN1-201ENST00000279247 EARS2Q5JPH6 523 aaKnown RBP20.68■□□□□ 0.9
CAPN1-201ENST00000279247 STAG2Q8N3U4 1231 aa20.68■□□□□ 0.9
CAPN1-201ENST00000279247 TMX4Q9H1E5 349 aaPredicted RBP20.68■□□□□ 0.9
CAPN1-201ENST00000279247 MKRN1Q9UHC7 482 aaKnown RBP20.68■□□□□ 0.9
CAPN1-201ENST00000279247 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
CAPN1-201ENST00000279247 ECM29Q5VYK3 1845 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 RCSD1Q6JBY9 416 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 RBM43Q6ZSC3 357 aaKnown RBP20.67■□□□□ 0.9
CAPN1-201ENST00000279247 SP8Q8IXZ3 490 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 DRC7Q8IY82 874 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 RNF26Q9BY78 433 aaPredicted RBP20.67■□□□□ 0.9
CAPN1-201ENST00000279247 TRIM5Q9C035 493 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 ZBTB7AO95365 584 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 FGRP09769 529 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 CLCN1P35523 988 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms