RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 USP17L4A6NCW7 530 aa14.14□□□□□ -0.15
SDE2-201ENST00000272091 CCDC93Q567U6 631 aa14.14□□□□□ -0.15
SDE2-201ENST00000272091 USP17L1Q7RTZ2 530 aa14.14□□□□□ -0.15
SDE2-201ENST00000272091 IQCA1Q86XH1 822 aa14.14□□□□□ -0.15
SDE2-201ENST00000272091 KIAA0825Q8IV33 1275 aa14.14□□□□□ -0.15
SDE2-201ENST00000272091 SHISA4Q96DD7 197 aa14.14□□□□□ -0.15
SDE2-201ENST00000272091 PSMD1Q99460 953 aa14.14□□□□□ -0.15
SDE2-201ENST00000272091 PPIP5K2O43314 1243 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 POLR3DP05423 398 aaPredicted RBP14.13□□□□□ -0.15
SDE2-201ENST00000272091 TFAP4Q01664 338 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 C8orf76Q96K31 380 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 FTOQ9C0B1 505 aaKnown RBP eCLIP14.13□□□□□ -0.15
SDE2-201ENST00000272091 CDK8P49336 464 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 SUPT20HQ8NEM7 779 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 NUP133Q8WUM0 1156 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 ZDHHC15Q96MV8 337 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 MTFR1LQ9H019 292 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 CDKL5O76039 1030 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
SDE2-201ENST00000272091 KRT85P78386 507 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 ZSCAN23Q3MJ62 389 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 TEKT1Q969V4 418 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 ALG1Q9BT22 464 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 USP40Q9NVE5 1235 aa14.13□□□□□ -0.15
SDE2-201ENST00000272091 ELP1O95163 1332 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 TSPY2A6NKD2 308 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 PICALMQ13492 652 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 R3HDM1Q15032 1099 aaKnown RBP14.12□□□□□ -0.15
SDE2-201ENST00000272091 SYNE3Q6ZMZ3 975 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 CRACR2BQ8N4Y2 399 aaPredicted RBP14.12□□□□□ -0.15
SDE2-201ENST00000272091 LEO1Q8WVC0 666 aaPredicted RBP14.12□□□□□ -0.15
SDE2-201ENST00000272091 SLC26A6Q9BXS9 759 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 MBD3O95983 291 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 GABPAQ06546 454 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 NFIAQ12857 509 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 ANKS1AQ92625 1134 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 MRIQ9BWK5 157 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 PLEKHA8P1O95397 391 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 UBE2HP62256 183 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 RTKN2Q8IZC4 609 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 RGS22Q8NE09 1264 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 ZNF277Q9NRM2 450 aaPredicted RBP14.12□□□□□ -0.15
SDE2-201ENST00000272091 TCP11L1Q9NUJ3 509 aa14.12□□□□□ -0.15
SDE2-201ENST00000272091 DDAH1O94760 285 aa14.11□□□□□ -0.15
SDE2-201ENST00000272091 KIF23Q02241 960 aaPredicted RBP14.11□□□□□ -0.15
SDE2-201ENST00000272091 ZFPM1Q8IX07 1006 aa14.11□□□□□ -0.15
SDE2-201ENST00000272091 TGFB2P61812 414 aa14.11□□□□□ -0.15
SDE2-201ENST00000272091 SSRP1Q08945 709 aaKnown RBP14.11□□□□□ -0.15
SDE2-201ENST00000272091 KRT40Q6A162 431 aa14.11□□□□□ -0.15
SDE2-201ENST00000272091 GRIPAP1Q4V328 841 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 AMOTL1Q8IY63 956 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 UPF1Q92900 1129 aaKnown RBP eCLIP14.1□□□□□ -0.154e-7■■■■□ 25.1
SDE2-201ENST00000272091 PGBD1Q96JS3 809 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 OSBPL5Q9H0X9 879 aaPredicted RBP14.1□□□□□ -0.15
SDE2-201ENST00000272091 MKNK2Q9HBH9 465 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 SLURP2P0DP57 97 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 HDLBPQ00341 1268 aaKnown RBP14.1□□□□□ -0.15
SDE2-201ENST00000272091 PKN1Q16512 942 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 CATIPQ7Z7H3 387 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 CCDC82Q8N4S0 544 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 USP28Q96RU2 1077 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.1□□□□□ -0.15
SDE2-201ENST00000272091 ZNF445P59923 1031 aa14.1□□□□□ -0.15
SDE2-201ENST00000272091 NT5C2P49902 561 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 CACNB3P54284 484 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 CPLX2Q6PUV4 134 aaKnown RBP14.09□□□□□ -0.15
SDE2-201ENST00000272091 DGKHQ86XP1 1220 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 TMTC3Q6ZXV5 915 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 PIM2Q9P1W9 311 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 FAM198AQ9UFP1 575 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 CNTNAP5Q8WYK1 1306 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 PLIN4Q96Q06 1357 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 TSPY3P0CV98 308 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 TSPY8P0CW00 308 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 PTGER2P43116 358 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 NOVP48745 357 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 TPRNQ4KMQ1 711 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 GMLQ99445 158 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 SCAND2PQ9GZW5 306 aaPredicted RBP14.09□□□□□ -0.15
SDE2-201ENST00000272091 SERPINA10Q9UK55 444 aa14.09□□□□□ -0.15
SDE2-201ENST00000272091 RASGRP2Q7LDG7 609 aa14.08□□□□□ -0.15
SDE2-201ENST00000272091 SRBD1Q8N5C6 995 aaKnown RBP14.08□□□□□ -0.15
SDE2-201ENST00000272091 CCDC196A0A1B0GTZ2 297 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 PPP2R5BQ15173 497 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 SLC35G1Q2M3R5 365 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 SH3BP5LQ7L8J4 393 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 NEDD1Q8NHV4 660 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 PSMD14O00487 310 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 CALM1P0DP23 149 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 CALM2P0DP24 149 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 CALM3P0DP25 149 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 ZNF444Q8N0Y2 327 aaPredicted RBP14.08□□□□□ -0.16
SDE2-201ENST00000272091 RNF26Q9BY78 433 aaPredicted RBP14.08□□□□□ -0.16
SDE2-201ENST00000272091 DNAJC18Q9H819 358 aa14.08□□□□□ -0.16
SDE2-201ENST00000272091 CSPP1Q1MSJ5 1256 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 TMEM47Q9BQJ4 181 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 RBM28Q9NW13 759 aaKnown RBP14.07□□□□□ -0.16
SDE2-201ENST00000272091 RCOR1Q9UKL0 485 aa14.07□□□□□ -0.16
SDE2-201ENST00000272091 hCG_1642624A0A1W2PR95 340 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms