RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 CICQ96RK0 1608 aaPredicted RBP13.6□□□□□ -0.23
SLC6A3-201ENST00000270349 ESPNB1AK53 854 aa13.6□□□□□ -0.23
SLC6A3-201ENST00000270349 NR1I2O75469 434 aa13.6□□□□□ -0.23
SLC6A3-201ENST00000270349 NLRP5P59047 1200 aa13.6□□□□□ -0.23
SLC6A3-201ENST00000270349 RBM10P98175 930 aaKnown RBP13.6□□□□□ -0.23
SLC6A3-201ENST00000270349 DNTTIP2Q5QJE6 756 aaKnown RBP13.6□□□□□ -0.23
SLC6A3-201ENST00000270349 USP40Q9NVE5 1235 aa13.6□□□□□ -0.23
SLC6A3-201ENST00000270349 VPS54Q9P1Q0 977 aa13.6□□□□□ -0.23
SLC6A3-201ENST00000270349 CLIC4Q9Y696 253 aa13.6□□□□□ -0.23
SLC6A3-201ENST00000270349 BECN2A8MW95 431 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 GOLGA6L19H0YKK7 550 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 PPP2R5BQ15173 497 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 MXD3Q9BW11 206 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 TAF1LQ8IZX4 1826 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 A0A1B0GVL5 298 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 HLA-DOAP06340 250 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 CCDC178Q5BJE1 867 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 DEFB132Q7Z7B7 95 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 TEKT1Q969V4 418 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 PKNOX2Q96KN3 472 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 PODXL2Q9NZ53 605 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 TACC3Q9Y6A5 838 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 BAZ2BQ9UIF8 2168 aaKnown RBP13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 BTBD18B2RXH4 712 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 EVX2Q03828 476 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 MTA3Q9BTC8 594 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 SALL1Q9NSC2 1324 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 LY75O60449 1722 aa13.59□□□□□ -0.23
SLC6A3-201ENST00000270349 IL1R1P14778 569 aa13.58□□□□□ -0.23
SLC6A3-201ENST00000270349 C12orf60Q5U649 245 aa13.58□□□□□ -0.23
SLC6A3-201ENST00000270349 PGBD1Q96JS3 809 aa13.58□□□□□ -0.23
SLC6A3-201ENST00000270349 RCOR1Q9UKL0 485 aa13.58□□□□□ -0.23
SLC6A3-201ENST00000270349 NOL7Q9UMY1 257 aaKnown RBP13.58□□□□□ -0.23
SLC6A3-201ENST00000270349 USP17L3A6NCW0 530 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 USP17L4A6NCW7 530 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 UBE2Q2LH0YL09 131 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 PPIP5K2O43314 1243 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 ORC4O43929 436 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 USP17L1Q7RTZ2 530 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 PNMA1Q8ND90 353 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 VAT1LQ9HCJ6 419 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 EP400Q96L91 3159 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 LAMA4Q16363 1823 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 PLEKHA8P1O95397 391 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 USP25Q9UHP3 1055 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 BRWD3Q6RI45 1802 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 DDAH1O94760 285 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 SBK1Q52WX2 424 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 HOMER1Q86YM7 354 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 FAM13BQ9NYF5 915 aa13.58□□□□□ -0.24
SLC6A3-201ENST00000270349 KIF28PB7ZC32 967 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 EIF6P56537 245 aaKnown RBP13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 TCP10Q12799 353 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 C15orf52Q6ZUT6 534 aaKnown RBP13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 CABP5Q9NP86 173 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 TYRO3Q06418 890 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 RASSF8Q8NHQ8 419 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 CLSTN2Q9H4D0 955 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 RTEL1Q9NZ71 1219 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 PCDHA7Q9UN72 937 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 C21orf2O43822 256 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 YEATS4O95619 227 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 RNF26Q9BY78 433 aaPredicted RBP13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 DAGLAQ9Y4D2 1042 aa13.57□□□□□ -0.24
SLC6A3-201ENST00000270349 BAZ2AQ9UIF9 1905 aaKnown RBP13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 C4AP0C0L4 1744 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 ARAP2Q8WZ64 1704 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 KRT2P35908 639 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 PLCD1P51178 756 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 FAM160A1Q05DH4 1040 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 NOSTRINQ8IVI9 506 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 RTFDC1Q9BY42 306 aaPredicted RBP13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 CEP131Q9UPN4 1083 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 MYH13Q9UKX3 1938 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 TNRC6CQ9HCJ0 1690 aaKnown RBP13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 CTAGE5O15320 804 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 GNAQP50148 359 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 PPP4CP60510 307 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 CCDC34Q96HJ3 373 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 STK36Q9NRP7 1315 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 GPR75-ASB3A0A0A6YYF3 556 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 CDK8P49336 464 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 LINC00301Q8NCQ3 95 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
SLC6A3-201ENST00000270349 SEC23AQ15436 765 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 NTRK3Q16288 839 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 HEATR3Q7Z4Q2 680 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 NR5A1Q13285 461 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 AOC3Q16853 763 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 PODNQ7Z5L7 613 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 SEC63Q9UGP8 760 aaKnown RBP13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 FLT1P17948 1338 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 MMP1P03956 469 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 SOGA3Q5TF21 947 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 LARGE2Q8N3Y3 721 aa13.55□□□□□ -0.24
SLC6A3-201ENST00000270349 POLR3EQ9NVU0 708 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms