RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 MAPKAPK5Q8IW41 473 aa29.18■■■□□ 2.26
SSBP4-201ENST00000270061 R3HDMLQ9H3Y0 253 aa29.18■■■□□ 2.26
SSBP4-201ENST00000270061 FLT1P17948 1338 aa29.18■■■□□ 2.26
SSBP4-201ENST00000270061 ZKSCAN1P17029 563 aaPredicted RBP29.18■■■□□ 2.26
SSBP4-201ENST00000270061 DGKZQ13574 1117 aa29.18■■■□□ 2.26
SSBP4-201ENST00000270061 TSGA10IPQ3SY00 556 aa29.18■■■□□ 2.26
SSBP4-201ENST00000270061 SLC9C2Q5TAH2 1124 aa29.18■■■□□ 2.26
SSBP4-201ENST00000270061 DHX36Q9H2U1 1008 aaKnown RBP29.18■■■□□ 2.26
SSBP4-201ENST00000270061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.18■■■□□ 2.26
SSBP4-201ENST00000270061 CAPN15O75808 1086 aa29.17■■■□□ 2.26
SSBP4-201ENST00000270061 SCYL3Q8IZE3 742 aa29.17■■■□□ 2.26
SSBP4-201ENST00000270061 DSCC1Q9BVC3 393 aa29.17■■■□□ 2.26
SSBP4-201ENST00000270061 PICK1Q9NRD5 415 aa29.17■■■□□ 2.26
SSBP4-201ENST00000270061 U3KPZ7 1027 aaPredicted RBP29.17■■■□□ 2.26
SSBP4-201ENST00000270061 SIPA1L1O43166 1804 aa29.17■■■□□ 2.26
SSBP4-201ENST00000270061 ATAD5Q96QE3 1844 aa29.17■■■□□ 2.26
SSBP4-201ENST00000270061 SLC27A2O14975 620 aa29.16■■■□□ 2.26
SSBP4-201ENST00000270061 CCDC129Q6ZRS4 1044 aa29.16■■■□□ 2.26
SSBP4-201ENST00000270061 APPBP2Q92624 585 aa29.16■■■□□ 2.26
SSBP4-201ENST00000270061 MCOLN1Q9GZU1 580 aa29.16■■■□□ 2.26
SSBP4-201ENST00000270061 SLKQ9H2G2 1235 aaPredicted RBP29.16■■■□□ 2.26
SSBP4-201ENST00000270061 PI4KBQ9UBF8 816 aa29.16■■■□□ 2.26
SSBP4-201ENST00000270061 CTNND1O60716 968 aaKnown RBP29.16■■■□□ 2.26
SSBP4-201ENST00000270061 FAM196BA6NMK8 535 aa29.15■■■□□ 2.26
SSBP4-201ENST00000270061 PDE6AP16499 860 aa29.15■■■□□ 2.26
SSBP4-201ENST00000270061 CRHR2Q13324 411 aa29.15■■■□□ 2.26
SSBP4-201ENST00000270061 UBE3CQ15386 1083 aa29.15■■■□□ 2.26
SSBP4-201ENST00000270061 OSBP2Q969R2 916 aa29.15■■■□□ 2.26
SSBP4-201ENST00000270061 ADD2P35612 726 aa29.14■■■□□ 2.26
SSBP4-201ENST00000270061 SLFNL1Q499Z3 407 aa29.14■■■□□ 2.26
SSBP4-201ENST00000270061 ABHD8Q96I13 439 aa29.14■■■□□ 2.26
SSBP4-201ENST00000270061 HERC5Q9UII4 1024 aaKnown RBP29.14■■■□□ 2.26
SSBP4-201ENST00000270061 PHIPQ8WWQ0 1821 aa29.14■■■□□ 2.26
SSBP4-201ENST00000270061 FKTNO75072 461 aa29.13■■■□□ 2.25
SSBP4-201ENST00000270061 DDIT3P35638 169 aa29.13■■■□□ 2.25
SSBP4-201ENST00000270061 KCNH4Q9UQ05 1017 aa29.13■■■□□ 2.25
SSBP4-201ENST00000270061 PTPRFP10586 1907 aa29.13■■■□□ 2.25
SSBP4-201ENST00000270061 USP5P45974 858 aa29.13■■■□□ 2.25
SSBP4-201ENST00000270061 FAM43AQ8N2R8 423 aa29.13■■■□□ 2.25
SSBP4-201ENST00000270061 SPRYD3Q8NCJ5 442 aa29.13■■■□□ 2.25
SSBP4-201ENST00000270061 ZNF532Q9HCE3 1301 aa29.12■■■□□ 2.25
SSBP4-201ENST00000270061 M0R2C6 588 aa29.12■■■□□ 2.25
SSBP4-201ENST00000270061 PTPRAP18433 802 aa29.12■■■□□ 2.25
SSBP4-201ENST00000270061 TAF1CQ15572 869 aaPredicted RBP29.12■■■□□ 2.25
SSBP4-201ENST00000270061 CTU1Q7Z7A3 348 aaKnown RBP29.12■■■□□ 2.25
SSBP4-201ENST00000270061 UPF3BQ9BZI7 483 aaKnown RBP29.12■■■□□ 2.25
SSBP4-201ENST00000270061 ZSWIM6Q9HCJ5 1215 aa29.12■■■□□ 2.25
SSBP4-201ENST00000270061 ZHX2Q9Y6X8 837 aa29.12■■■□□ 2.25
SSBP4-201ENST00000270061 MAGEB6P1A0A0J9YX57 407 aa29.11■■■□□ 2.25
SSBP4-201ENST00000270061 TTC14Q96N46 770 aa29.11■■■□□ 2.25
SSBP4-201ENST00000270061 RIOK1Q9BRS2 568 aaKnown RBP29.11■■■□□ 2.25
SSBP4-201ENST00000270061 PSMA5P28066 241 aa29.11■■■□□ 2.25
SSBP4-201ENST00000270061 ZCCHC17Q9NP64 241 aaKnown RBP29.11■■■□□ 2.25
SSBP4-201ENST00000270061 SAP30BPQ9UHR5 308 aaKnown RBP29.11■■■□□ 2.25
SSBP4-201ENST00000270061 BTBD19C9JJ37 291 aa29.1■■■□□ 2.25
SSBP4-201ENST00000270061 HLA-DOAP06340 250 aa29.1■■■□□ 2.25
SSBP4-201ENST00000270061 HSPD1P10809 573 aaKnown RBP29.1■■■□□ 2.25
SSBP4-201ENST00000270061 ZFYVE28Q9HCC9 887 aa29.1■■■□□ 2.25
SSBP4-201ENST00000270061 CHMP5Q9NZZ3 219 aa29.1■■■□□ 2.25
SSBP4-201ENST00000270061 NAV1Q8NEY1 1877 aa29.09■■■□□ 2.25
SSBP4-201ENST00000270061 TCRBV5S4A2TA0A5A2 114 aa29.09■■■□□ 2.25
SSBP4-201ENST00000270061 CXCL11O14625 94 aa29.09■■■□□ 2.25
SSBP4-201ENST00000270061 HSP90AA1P07900 732 aaKnown RBP29.09■■■□□ 2.25
SSBP4-201ENST00000270061 ADCK5Q3MIX3 580 aa29.09■■■□□ 2.25
SSBP4-201ENST00000270061 FOXP4Q8IVH2 680 aaPredicted RBP29.09■■■□□ 2.25
SSBP4-201ENST00000270061 CRACR2BQ8N4Y2 399 aaPredicted RBP29.09■■■□□ 2.25
SSBP4-201ENST00000270061 ANP32EQ9BTT0 268 aa29.09■■■□□ 2.25
SSBP4-201ENST00000270061 TRIM34Q9BYJ4 488 aa29.09■■■□□ 2.25
SSBP4-201ENST00000270061 CIZ1Q9ULV3 898 aaPredicted RBP29.09■■■□□ 2.25
SSBP4-201ENST00000270061 CASTP20810 708 aaKnown RBP29.08■■■□□ 2.25
SSBP4-201ENST00000270061 KRT32Q14532 448 aa29.08■■■□□ 2.25
SSBP4-201ENST00000270061 JAKMIP1Q96N16 626 aaKnown RBP29.08■■■□□ 2.25
SSBP4-201ENST00000270061 PUS7LQ9H0K6 701 aaKnown RBP29.08■■■□□ 2.25
SSBP4-201ENST00000270061 AFG3L2Q9Y4W6 797 aa29.08■■■□□ 2.25
SSBP4-201ENST00000270061 CAP2P40123 477 aa29.07■■■□□ 2.24
SSBP4-201ENST00000270061 SLC4A8Q2Y0W8 1093 aa29.07■■■□□ 2.24
SSBP4-201ENST00000270061 VPS53Q5VIR6 699 aa29.07■■■□□ 2.24
SSBP4-201ENST00000270061 METTL16Q86W50 562 aaKnown RBP29.07■■■□□ 2.24
SSBP4-201ENST00000270061 CYP46A1Q9Y6A2 500 aa29.07■■■□□ 2.24
SSBP4-201ENST00000270061 RUFY3Q7L099 469 aa29.06■■■□□ 2.24
SSBP4-201ENST00000270061 TMX3Q96JJ7 454 aa29.06■■■□□ 2.24
SSBP4-201ENST00000270061 CRNKL1Q9BZJ0 848 aaKnown RBP29.06■■■□□ 2.24
SSBP4-201ENST00000270061 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.06■■■□□ 2.24
SSBP4-201ENST00000270061 ANKRD23Q86SG2 305 aa29.06■■■□□ 2.24
SSBP4-201ENST00000270061 CUL4AQ13619 759 aa29.05■■■□□ 2.24
SSBP4-201ENST00000270061 DNAJC18Q9H819 358 aa29.05■■■□□ 2.24
SSBP4-201ENST00000270061 DDX60LQ5H9U9 1706 aaKnown RBP29.05■■■□□ 2.24
SSBP4-201ENST00000270061 A0A0G2JLL6 359 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-201ENST00000270061 CYP21A2P08686 494 aa29.04■■■□□ 2.24
SSBP4-201ENST00000270061 RRP1BQ14684 758 aaKnown RBP29.04■■■□□ 2.24
SSBP4-201ENST00000270061 PKN2Q16513 984 aaKnown RBP29.04■■■□□ 2.24
SSBP4-201ENST00000270061 PRRT2Q7Z6L0 340 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-201ENST00000270061 ALDH8A1Q9H2A2 487 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-201ENST00000270061 GPAA1O43292 621 aa29.03■■■□□ 2.24
SSBP4-201ENST00000270061 SP3Q02447 781 aa29.03■■■□□ 2.24
SSBP4-201ENST00000270061 MOGSQ13724 837 aa29.03■■■□□ 2.24
SSBP4-201ENST00000270061 FASTKD5Q7L8L6 764 aaKnown RBP29.03■■■□□ 2.24
SSBP4-201ENST00000270061 CCDC84Q86UT8 332 aaPredicted RBP29.03■■■□□ 2.24
SSBP4-201ENST00000270061 CTNNA3Q9UI47 895 aa29.03■■■□□ 2.24
SSBP4-201ENST00000270061 TRIM75PA6NK02 468 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms