RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 IGDCC4Q8TDY8 1250 aa16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 SAMSN1Q9NSI8 373 aaKnown RBP16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 CUTAO60888 179 aa16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 VSTM4Q8IW00 320 aa16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 SMARCE1Q969G3 411 aa16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 TUBE1Q9UJT0 475 aa16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 PPP2R2CQ9Y2T4 447 aa16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 PCDHB6Q9Y5E3 794 aa16.56■□□□□ 0.24
SFSWAP-201ENST00000261674 FMR1Q06787 632 aaKnown RBP eCLIP16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 RESP18Q5W5W9 173 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 NOSTRINQ8IVI9 506 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 ZNF34Q8IZ26 560 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 IFNL3Q8IZI9 196 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 NOL10Q9BSC4 688 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 L2HGDHQ9H9P8 463 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 LY9Q9HBG7 655 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 LZTFL1Q9NQ48 299 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 ARGLU1Q9NWB6 273 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 ABCF2Q9UG63 623 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 JAG2Q9Y219 1238 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 ERICH2A1L162 156 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 PPP6R2O75170 966 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 PDE8BO95263 885 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 CASQ1P31415 396 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 DHX58Q96C10 678 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 WDR24Q96S15 920 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 STRBPQ96SI9 672 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 MAP3K14Q99558 947 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 BAZ2BQ9UIF8 2168 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 ZSCAN12O43309 604 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 POSTNQ15063 836 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 FBXL16Q8N461 479 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 OXER1Q8TDS5 423 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 CCDC34Q96HJ3 373 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 HPSEQ9Y251 543 aa16.55■□□□□ 0.24
SFSWAP-201ENST00000261674 CCP110O43303 1012 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 RTN1Q16799 776 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 TOGARAM2Q6ZUX3 1019 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 TMEM87BQ96K49 555 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 TIGD1Q96MW7 591 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 MPHOSPH8Q99549 860 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 MAN1B1Q9UKM7 699 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 CTSWP56202 376 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 AKAP17AQ02040 695 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 NFIXQ14938 502 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 WTAPQ15007 396 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 NTRK3Q16288 839 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 LRP2BPQ9P2M1 347 aa16.54■□□□□ 0.24
SFSWAP-201ENST00000261674 MTF1Q14872 753 aa16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 TRIM65Q6PJ69 517 aa16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 REXO1L1PQ8IX06 675 aa16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 SMYD4Q8IYR2 804 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 ZCCHC17Q9NP64 241 aaKnown RBP16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 FANCGO15287 622 aa16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 CCDC12Q8WUD4 166 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 INTS13Q9NVM9 706 aa16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 CSF1RP07333 972 aa16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 PNMA6AP0CW24 399 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 SART3Q15020 963 aaKnown RBP16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-201ENST00000261674 ERVV-1B6SEH8 477 aa16.52■□□□□ 0.24
SFSWAP-201ENST00000261674 SMIM22K7EJ46 135 aa16.52■□□□□ 0.24
SFSWAP-201ENST00000261674 TOB1P50616 345 aaPredicted RBP16.52■□□□□ 0.24
SFSWAP-201ENST00000261674 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
SFSWAP-201ENST00000261674 NARFQ9UHQ1 456 aa16.52■□□□□ 0.24
SFSWAP-201ENST00000261674 ARHGAP6O43182 974 aa16.52■□□□□ 0.23
SFSWAP-201ENST00000261674 PRDM1O75626 825 aa16.52■□□□□ 0.23
SFSWAP-201ENST00000261674 BCAMP50895 628 aa16.52■□□□□ 0.23
SFSWAP-201ENST00000261674 SF3B2Q13435 895 aaKnown RBP16.52■□□□□ 0.23
SFSWAP-201ENST00000261674 CCDC93Q567U6 631 aa16.52■□□□□ 0.23
SFSWAP-201ENST00000261674 SPATA5Q8NB90 893 aa16.52■□□□□ 0.23
SFSWAP-201ENST00000261674 GPR101Q96P66 508 aaPredicted RBP16.52■□□□□ 0.23
SFSWAP-201ENST00000261674 PATL2C9JE40 543 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 AKNAD1Q5T1N1 836 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 COL23A1Q86Y22 540 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 SDR42E1Q8WUS8 393 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 UBAC1Q9BSL1 405 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 VPS54Q9P1Q0 977 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 VWA3AA6NCI4 1184 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 H2AFXP16104 143 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 SPECC1LQ69YQ0 1117 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 ZBTB22O15209 634 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 TEX33O43247 280 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 PDE8AO60658 829 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 NTSR2O95665 410 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 LCORLQ8N3X6 602 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 EPSTI1Q96J88 318 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 CSRNP2Q9H175 543 aa16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 PUF60Q9UHX1 559 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-201ENST00000261674 FHOD1Q9Y613 1164 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms