RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 NTRK3Q16288 839 aa16.86■□□□□ 0.29
TRAFD1-201ENST00000257604 NOM1Q5C9Z4 860 aaKnown RBP16.86■□□□□ 0.29
TRAFD1-201ENST00000257604 MFSD14BQ5SR56 506 aa16.86■□□□□ 0.29
TRAFD1-201ENST00000257604 ZNF202O95125 648 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 PFKFB1P16118 471 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 DMTNQ08495 405 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 SNW1Q13573 536 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 ALX1Q15699 326 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 TXNRD1Q16881 649 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 HOMER1Q86YM7 354 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 SPATA31A6Q5VVP1 1343 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 CREBRFQ8IUR6 639 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 PNPLA7Q6ZV29 1317 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 GTF2F1P35269 517 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 EVCP57679 992 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 ZNF804AQ7Z570 1209 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 STAMQ92783 540 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 TRMT1Q9NXH9 659 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 RTEL1Q9NZ71 1219 aa16.85■□□□□ 0.29
TRAFD1-201ENST00000257604 SLC3A2P08195 630 aaKnown RBP16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 LIFRP42702 1097 aa16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 SYKP43405 635 aa16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 KCNG4Q8TDN1 519 aa16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 GPKOWQ92917 476 aaPredicted RBP eCLIP16.84■□□□□ 0.298e-6■■□□□ 13.6
TRAFD1-201ENST00000257604 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 PCDHB6Q9Y5E3 794 aa16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 DDR1Q08345 913 aa16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 CRACR2BQ8N4Y2 399 aaPredicted RBP16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 CTCFLQ8NI51 663 aaPredicted RBP16.84■□□□□ 0.29
TRAFD1-201ENST00000257604 PLCD1P51178 756 aa16.83■□□□□ 0.29
TRAFD1-201ENST00000257604 PNOCQ13519 176 aa16.83■□□□□ 0.29
TRAFD1-201ENST00000257604 ZNF174Q15697 407 aa16.83■□□□□ 0.29
TRAFD1-201ENST00000257604 ADALQ6DHV7 355 aa16.83■□□□□ 0.29
TRAFD1-201ENST00000257604 BRAPQ7Z569 592 aa16.83■□□□□ 0.29
TRAFD1-201ENST00000257604 RASGRP4Q8TDF6 673 aa16.83■□□□□ 0.29
TRAFD1-201ENST00000257604 FOXN1O15353 648 aa16.83■□□□□ 0.28
TRAFD1-201ENST00000257604 DPCR1Q3MIW9 517 aa16.83■□□□□ 0.28
TRAFD1-201ENST00000257604 SGMS1Q86VZ5 419 aa16.83■□□□□ 0.28
TRAFD1-201ENST00000257604 MROH7-TTC4A0A0A0MT08 1334 aa16.83■□□□□ 0.28
TRAFD1-201ENST00000257604 TSPY3P0CV98 308 aa16.83■□□□□ 0.28
TRAFD1-201ENST00000257604 TSPY8P0CW00 308 aa16.83■□□□□ 0.28
TRAFD1-201ENST00000257604 PDE4BQ07343 736 aa16.83■□□□□ 0.28
TRAFD1-201ENST00000257604 ZNF444Q8N0Y2 327 aaPredicted RBP16.83■□□□□ 0.28
TRAFD1-201ENST00000257604 XDHP47989 1333 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 CCDC196A0A1B0GTZ2 297 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 SMC2O95347 1197 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 FMNL1O95466 1100 aaPredicted RBP16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 BTDP43251 543 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 RBM5P52756 815 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 CLEC10AQ8IUN9 316 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 POLLQ9UGP5 575 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 COL22A1Q8NFW1 1626 aaPredicted RBP16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 VGLL3A8MV65 326 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 GOLGA6L6A8MZA4 724 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 IFNAR1P17181 557 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 ZNF827Q17R98 1081 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 NOSTRINQ8IVI9 506 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 TEX11Q8IYF3 940 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 UIMC1Q96RL1 719 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 CD209Q9NNX6 404 aa16.82■□□□□ 0.28
TRAFD1-201ENST00000257604 LMOD1P29536 600 aaPredicted RBP16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 USP49Q70CQ1 688 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 KAT14Q9H8E8 782 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 CASP1P29466 404 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 CACNB3P54284 484 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 NLRP5P59047 1200 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 EARS2Q5JPH6 523 aaKnown RBP16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 PROM2Q8N271 834 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 ANKRD36CQ5JPF3 1778 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 BAZ2AQ9UIF9 1905 aaKnown RBP16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 CDC25AP30304 524 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 AFMP43652 599 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 STX1AQ16623 288 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 ZNF771Q7L3S4 317 aaPredicted RBP16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 FMR1NBQ8N0W7 255 aaPredicted RBP16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 STAG2Q8N3U4 1231 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 CNNM3Q8NE01 707 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 CLIP2Q9UDT6 1046 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 NRAPQ86VF7 1730 aa16.81■□□□□ 0.28
TRAFD1-201ENST00000257604 DEXIO95424 95 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 TPD52L1Q16890 204 aaPredicted RBP16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 TMTC2Q8N394 836 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 DBNDD1Q9H9R9 158 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 RTL9Q8NET4 1388 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 ZBTB22O15209 634 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 COBLO75128 1261 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 BAG3O95817 575 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 MMP10P09238 476 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 SLC39A14Q15043 492 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 SPTY2D1Q68D10 685 aaPredicted RBP16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 SHC4Q6S5L8 630 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 TICAM2Q86XR7 235 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms