RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 MED23Q9ULK4 1368 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 ADGRB1O14514 1584 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 ERLIN2O94905 339 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 PLCD1P51178 756 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 RRAGBQ5VZM2 374 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 HS2ST1Q7LGA3 356 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 TRMT1LQ7Z2T5 733 aaKnown RBP10.44□□□□□ -0.74
PDE6A-201ENST00000255266 FSIP1Q8NA03 581 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 LRRC45Q96CN5 670 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 TMEM106CQ9BVX2 250 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 CD209Q9NNX6 404 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 SERPINB13Q9UIV8 391 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 KIF20BQ96Q89 1820 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 CAMTA2O94983 1202 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 CFBP00751 764 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 RFX1P22670 979 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 CHRNA5P30532 468 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 APOBRQ0VD83 1088 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 SLC27A2O14975 620 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 USH1GQ495M9 461 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 STRIP1Q5VSL9 837 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 CCDC117Q8IWD4 279 aaPredicted RBP10.43□□□□□ -0.74
PDE6A-201ENST00000255266 MAP7D2Q96T17 732 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 ZBTB21Q9ULJ3 1066 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 FMNL3Q8IVF7 1028 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 TRIM6Q9C030 488 aaPredicted RBP10.43□□□□□ -0.74
PDE6A-201ENST00000255266 SP4Q02446 784 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 SF3B3Q15393 1217 aaKnown RBP10.43□□□□□ -0.74
PDE6A-201ENST00000255266 FAM47CQ5HY64 1035 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 TBC1D5Q92609 795 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 CDHR1Q96JP9 859 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 LRRC2Q9BYS8 371 aa10.43□□□□□ -0.74
PDE6A-201ENST00000255266 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 H0YCG3 227 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 CCDC65Q8IXS2 484 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 JPH2Q9BR39 696 aaPredicted RBP10.42□□□□□ -0.74
PDE6A-201ENST00000255266 HOXC10Q9NYD6 342 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 PALM3A6NDB9 673 aaPredicted RBP10.42□□□□□ -0.74
PDE6A-201ENST00000255266 FDX1P10109 184 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 MTIF2P46199 727 aaKnown RBP10.42□□□□□ -0.74
PDE6A-201ENST00000255266 SPOUT1Q5T280 376 aaKnown RBP10.42□□□□□ -0.74
PDE6A-201ENST00000255266 ELMSAN1Q6PJG2 1045 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 TMEM179Q6ZVK1 233 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 NWD1Q149M9 1564 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 PUS3Q9BZE2 481 aaKnown RBP10.42□□□□□ -0.74
PDE6A-201ENST00000255266 POLR1AO95602 1720 aaPredicted RBP10.42□□□□□ -0.74
PDE6A-201ENST00000255266 CCDC129Q6ZRS4 1044 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 ADGRB2O60241 1585 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 ABCC12Q96J65 1359 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 CCND2P30279 289 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 RILPL1Q5EBL4 403 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 TCERG1LQ5VWI1 586 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 MFSD14CQ5VZR4 134 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 ZNF34Q8IZ26 560 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 PKNOX2Q96KN3 472 aa10.42□□□□□ -0.74
PDE6A-201ENST00000255266 ARHGEF35A5YM69 484 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 TMEM232C9JQI7 657 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 PRDM1O75626 825 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 NRBP2Q9NSY0 501 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 PODXL2Q9NZ53 605 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 KCNH4Q9UQ05 1017 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 ADAMTSL3P82987 1691 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 TMOD1P28289 359 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 MICALL2Q8IY33 904 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 ZFYVE28Q9HCC9 887 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 CCT6AP40227 531 aaKnown RBP10.41□□□□□ -0.74
PDE6A-201ENST00000255266 CCDC181Q5TID7 509 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 SLFN12Q8IYM2 578 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 AGBL3Q8NEM8 1001 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 BICDL2A1A5D9 508 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 RPL13P26373 211 aaKnown RBP10.41□□□□□ -0.74
PDE6A-201ENST00000255266 SSR1P43307 286 aaKnown RBP10.41□□□□□ -0.74
PDE6A-201ENST00000255266 COL23A1Q86Y22 540 aaPredicted RBP10.41□□□□□ -0.74
PDE6A-201ENST00000255266 GLG1Q92896 1179 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 ACBD3Q9H3P7 528 aa10.41□□□□□ -0.74
PDE6A-201ENST00000255266 MCM7P33993 719 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 ASIC1P78348 528 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 SPA17Q15506 151 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 LETM2Q2VYF4 491 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 FAM47AQ5JRC9 791 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 GIMAP6Q6P9H5 292 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 ARHGEF28Q8N1W1 1705 aaKnown RBP10.4□□□□□ -0.74
PDE6A-201ENST00000255266 CNOT7Q9UIV1 285 aaKnown RBP10.4□□□□□ -0.74
PDE6A-201ENST00000255266 TRAK2O60296 914 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 BMP3P12645 472 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 UBXN2AP68543 259 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 CCDC183Q5T5S1 534 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 IQCEQ6IPM2 695 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 SV2BQ7L1I2 683 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 DCAF4Q8WV16 495 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 TAF4BQ92750 862 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 AMNQ9BXJ7 453 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 GINM1Q9NU53 330 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 KDM3AQ9Y4C1 1321 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 POTEB2H3BUK9 544 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 SGSM2O43147 1006 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 ADD2P35612 726 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 SYKP43405 635 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 STAT2P52630 851 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 RSBN1LQ6PCB5 846 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms