RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 BPIFA3Q9BQP9 254 aa10.62□□□□□ -0.71
RPA1-201ENST00000254719 SRP68Q9UHB9 627 aaKnown RBP10.62□□□□□ -0.71
RPA1-201ENST00000254719 ENAHQ8N8S7 591 aaPredicted RBP10.61□□□□□ -0.71
RPA1-201ENST00000254719 GNL3LQ9NVN8 582 aaKnown RBP10.61□□□□□ -0.71
RPA1-201ENST00000254719 GOLGA8BA8MQT2 603 aa10.61□□□□□ -0.71
RPA1-201ENST00000254719 IQSEC3Q9UPP2 1182 aaPredicted RBP10.61□□□□□ -0.71
RPA1-201ENST00000254719 PCDHB6Q9Y5E3 794 aa10.61□□□□□ -0.71
RPA1-201ENST00000254719 BTBD18B2RXH4 712 aa10.61□□□□□ -0.71
RPA1-201ENST00000254719 NCOA7Q8NI08 942 aa10.61□□□□□ -0.71
RPA1-201ENST00000254719 WASF1Q92558 559 aa10.61□□□□□ -0.71
RPA1-201ENST00000254719 ZNF592Q92610 1267 aa10.61□□□□□ -0.71
RPA1-201ENST00000254719 TMEM232C9JQI7 657 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 ACTN4O43707 911 aaKnown RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 ZNF202O95125 648 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 FMNL1O95466 1100 aaPredicted RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 SPECC1Q5M775 1068 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 CTR9Q6PD62 1173 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 MIGA1Q8NAN2 632 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 NSUN4Q96CB9 384 aaKnown RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 EXOC5O00471 708 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 ZNF213O14771 459 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 ZNF18P17022 549 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 IMMTQ16891 758 aaKnown RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 CCDC93Q567U6 631 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 CCDC24Q8N4L8 307 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 KCNJ14Q9UNX9 436 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 THRAP3Q9Y2W1 955 aaKnown RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 MYH7BA7E2Y1 1941 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 FER1L6Q2WGJ9 1857 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 RNF225M0QZC1 329 aaPredicted RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 MARCKSP29966 332 aaPredicted RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 TBX2Q13207 712 aaPredicted RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 ANO1Q5XXA6 986 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 GRAMD1CQ8IYS0 662 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 CRACR2BQ8N4Y2 399 aaPredicted RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 MRFAP1L1Q96HT8 127 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 DACH1Q9UI36 760 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 PLEKHA8P1O95397 391 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 YEATS4O95619 227 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 CMA1P23946 247 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 TRIM65Q6PJ69 517 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 CCDC94Q9BW85 323 aaPredicted RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 CNNM1Q9NRU3 951 aa10.6□□□□□ -0.71
RPA1-201ENST00000254719 ORC3Q9UBD5 711 aaPredicted RBP10.6□□□□□ -0.71
RPA1-201ENST00000254719 STK36Q9NRP7 1315 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 ATAD5Q96QE3 1844 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 MMP1P03956 469 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 SLC3A2P08195 630 aaKnown RBP10.59□□□□□ -0.71
RPA1-201ENST00000254719 HMGB2P26583 209 aaKnown RBP10.59□□□□□ -0.71
RPA1-201ENST00000254719 GPS2Q13227 327 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 TRIM22Q8IYM9 498 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 CEP57L1Q8IYX8 460 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
RPA1-201ENST00000254719 ST7Q9NRC1 585 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 IFNAR1P17181 557 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 CASP1P29466 404 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 GOLGA8FQ08AF8 430 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 NCBP1Q09161 790 aaKnown RBP10.59□□□□□ -0.71
RPA1-201ENST00000254719 GOLGA8DPQ0D2H9 430 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 PNOCQ13519 176 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 AKNAD1Q5T1N1 836 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 IDH1O75874 414 aaKnown RBP10.59□□□□□ -0.71
RPA1-201ENST00000254719 CYP2D6P10635 497 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 FBXW7Q969H0 707 aa10.59□□□□□ -0.71
RPA1-201ENST00000254719 KIF2AO00139 706 aaPredicted RBP10.58□□□□□ -0.72
RPA1-201ENST00000254719 DMTNQ08495 405 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 FSIP1Q8NA03 581 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 PHF20Q9BVI0 1012 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 ARGLU1Q9NWB6 273 aaPredicted RBP10.58□□□□□ -0.72
RPA1-201ENST00000254719 FAM205AQ6ZU69 1335 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 CYTH3O43739 400 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 ADAMTS2O95450 1211 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 ABL1P00519 1130 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 SMAP1Q8IYB5 467 aaPredicted RBP10.58□□□□□ -0.72
RPA1-201ENST00000254719 ZNF446Q9NWS9 450 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 hCG_1642624A0A1W2PR95 340 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 PRDX5P30044 214 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 E2F4Q16254 413 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 ATL3Q6DD88 541 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
RPA1-201ENST00000254719 CNTNAP4Q9C0A0 1308 aa10.58□□□□□ -0.72
RPA1-201ENST00000254719 DYNC1I1O14576 645 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 CBFA2T2O43439 604 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 NEMFO60524 1076 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 PPP6R2O75170 966 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 IPO7O95373 1038 aaKnown RBP10.57□□□□□ -0.72
RPA1-201ENST00000254719 FNBP4Q8N3X1 1017 aaPredicted RBP10.57□□□□□ -0.72
RPA1-201ENST00000254719 BSDC1Q9NW68 430 aaPredicted RBP10.57□□□□□ -0.72
RPA1-201ENST00000254719 SMTNL1A8MU46 457 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 SPTLC2O15270 562 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 NFIXQ14938 502 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 AOPEPQ8N6M6 819 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 MYH4Q9Y623 1939 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 CNTNAP5Q8WYK1 1306 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 PBX1P40424 430 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 ME1P48163 572 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms