RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 NLRP5P59047 1200 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 CXCL9Q07325 125 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 CABP5Q9NP86 173 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 PKD2L1Q9P0L9 805 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 TJP1Q07157 1748 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 DDNO94850 711 aaPredicted RBP13.51□□□□□ -0.25
LIN28A-201ENST00000254231 HLA-DOAP06340 250 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 PDCP20941 246 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 KRT85P78386 507 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 FANCBQ8NB91 859 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 MTFR1LQ9H019 292 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 RNF181Q9P0P0 153 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 C4BP0C0L5 1744 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 FAM205CA6NFA0 338 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 CDC25AP30304 524 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 EXOSC10Q01780 885 aaKnown RBP13.51□□□□□ -0.25
LIN28A-201ENST00000254231 NBPF11Q86T75 865 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 TBC1D22AQ8WUA7 517 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 STAMQ92783 540 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 CEP95Q96GE4 821 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 CNNM2Q9H8M5 875 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
LIN28A-201ENST00000254231 FLT1P17948 1338 aa13.5□□□□□ -0.25
LIN28A-201ENST00000254231 SH2B2O14492 632 aaPredicted RBP13.5□□□□□ -0.25
LIN28A-201ENST00000254231 SAFBQ15424 915 aaKnown RBP eCLIP13.5□□□□□ -0.25
LIN28A-201ENST00000254231 SLF2Q8IX21 1173 aa13.5□□□□□ -0.25
LIN28A-201ENST00000254231 GOLGA6L3A6NEY3 463 aa13.5□□□□□ -0.25
LIN28A-201ENST00000254231 PODNQ7Z5L7 613 aa13.5□□□□□ -0.25
LIN28A-201ENST00000254231 RTFDC1Q9BY42 306 aaPredicted RBP13.5□□□□□ -0.25
LIN28A-201ENST00000254231 SPON1Q9HCB6 807 aa13.5□□□□□ -0.25
LIN28A-201ENST00000254231 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
LIN28A-201ENST00000254231 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
LIN28A-201ENST00000254231 A0A1B0GVL5 298 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 BRD1O95696 1058 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 UBXN2AP68543 259 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 NOM1Q5C9Z4 860 aaKnown RBP13.49□□□□□ -0.25
LIN28A-201ENST00000254231 IGDCC4Q8TDY8 1250 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 SDF4Q9BRK5 362 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 CUL4AQ13619 759 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 SEPT2Q15019 361 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 OXER1Q8TDS5 423 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 KRT40Q6A162 431 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 TTBK2Q6IQ55 1244 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 USP28Q96RU2 1077 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
LIN28A-201ENST00000254231 GH2P01242 217 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 FMR1Q06787 632 aaKnown RBP eCLIP13.48□□□□□ -0.25
LIN28A-201ENST00000254231 ATP8A2Q9NTI2 1148 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 SPEF2Q9C093 1822 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 FAM170AA1A519 330 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 PEX10O60683 326 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 PFKFB2O60825 505 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 ZNF174Q15697 407 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 GPT2Q8TD30 523 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 COA7Q96BR5 231 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 CLIC6Q96NY7 704 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 HDAC9Q9UKV0 1011 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
LIN28A-201ENST00000254231 HPS5Q9UPZ3 1129 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 FDPSP14324 419 aaKnown RBP13.48□□□□□ -0.25
LIN28A-201ENST00000254231 CIAPIN1Q6FI81 312 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 TTC6Q86TZ1 520 aa13.48□□□□□ -0.25
LIN28A-201ENST00000254231 USP17L5A8MUK1 530 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 MYO1BO43795 1136 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 ERCC3P19447 782 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 SP4Q02446 784 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 C12orf60Q5U649 245 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 JAKMIP3Q5VZ66 844 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 MICALL2Q8IY33 904 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 POLD4Q9HCU8 107 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 SEMA3EO15041 775 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 PLS1Q14651 629 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 EEF2KMTQ96G04 330 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 ZNF512BQ96KM6 892 aaPredicted RBP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 LMBRD1Q9NUN5 540 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 DACT1Q9NYF0 836 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 CLIC4Q9Y696 253 aa13.47□□□□□ -0.25
LIN28A-201ENST00000254231 MYO5AQ9Y4I1 1855 aaKnown RBP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 GMPSP49915 693 aaPredicted RBP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 INTS4Q96HW7 963 aaKnown RBP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 ARPP21Q9UBL0 812 aaPredicted RBP13.47□□□□□ -0.25
LIN28A-201ENST00000254231 LAMB4A4D0S4 1761 aa13.46□□□□□ -0.25
LIN28A-201ENST00000254231 LIG1P18858 919 aa13.46□□□□□ -0.25
LIN28A-201ENST00000254231 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.25
LIN28A-201ENST00000254231 GJA10Q969M2 543 aa13.46□□□□□ -0.25
LIN28A-201ENST00000254231 TMEM63CQ9P1W3 806 aa13.46□□□□□ -0.25
LIN28A-201ENST00000254231 CNOT7Q9UIV1 285 aaKnown RBP13.46□□□□□ -0.25
LIN28A-201ENST00000254231 KLRF2D3W0D1 207 aa13.46□□□□□ -0.26
LIN28A-201ENST00000254231 COBLO75128 1261 aa13.46□□□□□ -0.26
LIN28A-201ENST00000254231 WDHD1O75717 1129 aaPredicted RBP13.46□□□□□ -0.26
LIN28A-201ENST00000254231 MCM7P33993 719 aa13.46□□□□□ -0.26
LIN28A-201ENST00000254231 KIAA2012Q0VF49 1180 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms