RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CFAP100Q494V2 611 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 TMED8Q6PL24 325 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 APOA5Q6Q788 366 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 LUZP1Q86V48 1076 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 TRIM22Q8IYM9 498 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 PAF1Q8N7H5 531 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 CCDC148Q8NFR7 591 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 FAM89AQ96GI7 184 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 NAA15Q9BXJ9 866 aaKnown RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 L2HGDHQ9H9P8 463 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 CCDC196A0A1B0GTZ2 297 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 KLRG2A4D1S0 409 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 EFCAB8A8MWE9 144 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 ARHGAP6O43182 974 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 PDE8AO60658 829 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 PPP6R2O75170 966 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 PDE6AP16499 860 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 ITGA6P23229 1130 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 BRD3Q15059 726 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 RESP18Q5W5W9 173 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 TMC6Q7Z403 805 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 C4orf32Q8N8J7 132 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 ANKS1AQ92625 1134 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 ZNHIT6Q9NWK9 470 aaKnown RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 IKBKBO14920 756 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 GPAA1O43292 621 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 URI1O94763 535 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 SLC39A14Q15043 492 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 MYSM1Q5VVJ2 828 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 GPR161Q8N6U8 529 aaKnown RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 ZBTB3Q9H5J0 574 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 NCOA5Q9HCD5 579 aaKnown RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 PLIN4Q96Q06 1357 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 NLRP12P59046 1061 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 SAMD1Q6SPF0 538 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 CTCFLQ8NI51 663 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 TBC1D2BQ9UPU7 963 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 CLIC4Q9Y696 253 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 TTLL12Q14166 644 aaPredicted RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 FBXO33Q7Z6M2 555 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 METTL16Q86W50 562 aaKnown RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 CCAR2Q8N163 923 aaKnown RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 CACTINQ8WUQ7 758 aaKnown RBP4.74□□□□□ -1.65
UBE4A-201ENST00000252108 GJB4Q9NTQ9 266 aa4.74□□□□□ -1.65
UBE4A-201ENST00000252108 CALRP27797 417 aaKnown RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 MYL5Q02045 173 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 CKAP4Q07065 602 aaKnown RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 STK3Q13188 491 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 E2F4Q16254 413 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 RCSD1Q6JBY9 416 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 FNBP4Q8N3X1 1017 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 LRRC15Q8TF66 581 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 RUFY1Q96T51 708 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 DEF6Q9H4E7 631 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 LUC7LQ9NQ29 371 aaKnown RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 PRDM11Q9NQV5 511 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 TFIP11Q9UBB9 837 aaKnown RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 NRBP1Q9UHY1 535 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 FBXO2Q9UK22 296 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 MYH4Q9Y623 1939 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 IFNAR1P17181 557 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 TRIM14Q14142 442 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 CLEC4GQ6UXB4 293 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 AIDAQ96BJ3 306 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 CCDC51Q96ER9 411 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 A0A087X0B3 334 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 SPTLC2O15270 562 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 KCNA4P22459 653 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 CMA1P23946 247 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 TXLNAP40222 546 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 UBASH3AP57075 661 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 ETF1P62495 437 aaKnown RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 AOPEPQ8N6M6 819 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 CLEC11AQ9Y240 323 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 NDUFA8P51970 172 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 EVX2Q03828 476 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 NCBP1Q09161 790 aaKnown RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 STIM1Q13586 685 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 TRIM65Q6PJ69 517 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 PDILTQ8N807 584 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 TRIML1Q8N9V2 468 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 LINC00116Q8NCU8 138 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 LPIN2Q92539 896 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 MTRQ99707 1265 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.73□□□□□ -1.653e-6■■■■■ 33.3
UBE4A-201ENST00000252108 WDR81Q562E7 1941 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 FMNL1O95466 1100 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 IFIT1P09914 478 aaKnown RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 ZSCAN20P17040 1043 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 GUCY1A2P33402 732 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 SYKP43405 635 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 TROAPQ12815 778 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 TTF1Q15361 905 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 ARHGAP29Q52LW3 1261 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 EARS2Q5JPH6 523 aaKnown RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 NFXL1Q6ZNB6 911 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 HDXQ7Z353 690 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 MPNDQ8N594 471 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 ZNF579Q8NAF0 562 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms