RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 GRIK5Q16478 980 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 LONRF3Q496Y0 759 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 HSP90AA4PQ58FG1 418 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 TMTC2Q8N394 836 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 FNBP4Q8N3X1 1017 aaPredicted RBP18.15■□□□□ 0.5
LRFN1-201ENST00000248668 MCM9Q9NXL9 1143 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 SRCAPQ6ZRS2 3230 aa18.15■□□□□ 0.5
LRFN1-201ENST00000248668 SMC2O95347 1197 aa18.14■□□□□ 0.5
LRFN1-201ENST00000248668 RC3H1Q5TC82 1133 aaKnown RBP18.14■□□□□ 0.5
LRFN1-201ENST00000248668 CATIPQ7Z7H3 387 aa18.14■□□□□ 0.5
LRFN1-201ENST00000248668 STK36Q9NRP7 1315 aa18.14■□□□□ 0.5
LRFN1-201ENST00000248668 PTPN21Q16825 1174 aa18.14■□□□□ 0.49
LRFN1-201ENST00000248668 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.49
LRFN1-201ENST00000248668 LRRC4BQ9NT99 713 aa18.14■□□□□ 0.49
LRFN1-201ENST00000248668 BCORQ6W2J9 1755 aa18.14■□□□□ 0.49
LRFN1-201ENST00000248668 ZSCAN20P17040 1043 aaPredicted RBP18.14■□□□□ 0.49
LRFN1-201ENST00000248668 LMOD1P29536 600 aaPredicted RBP18.14■□□□□ 0.49
LRFN1-201ENST00000248668 CRNKL1Q9BZJ0 848 aaKnown RBP18.14■□□□□ 0.49
LRFN1-201ENST00000248668 ANKRD2Q9GZV1 360 aa18.14■□□□□ 0.49
LRFN1-201ENST00000248668 CACNA1SQ13698 1873 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 TERF1P54274 439 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 EARS2Q5JPH6 523 aaKnown RBP18.13■□□□□ 0.49
LRFN1-201ENST00000248668 CNBD1Q8NA66 436 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 C16orf45Q96MC5 204 aaPredicted RBP18.13■□□□□ 0.49
LRFN1-201ENST00000248668 BRIP1Q9BX63 1249 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 KCNH3Q9ULD8 1083 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 TPM3P06753 285 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 GRAMD1CQ8IYS0 662 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 CNNM3Q8NE01 707 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 ANAPC4Q9UJX5 808 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 PPP6R2O75170 966 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 USP49Q70CQ1 688 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 KRI1Q8N9T8 703 aaKnown RBP18.13■□□□□ 0.49
LRFN1-201ENST00000248668 DYNLL2Q96FJ2 89 aa18.13■□□□□ 0.49
LRFN1-201ENST00000248668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
LRFN1-201ENST00000248668 DMTNQ08495 405 aa18.12■□□□□ 0.49
LRFN1-201ENST00000248668 LAMB2P55268 1798 aa18.12■□□□□ 0.49
LRFN1-201ENST00000248668 TSPY2A6NKD2 308 aa18.12■□□□□ 0.49
LRFN1-201ENST00000248668 DYNC1I1O14576 645 aa18.12■□□□□ 0.49
LRFN1-201ENST00000248668 VEGFAP15692 232 aaPredicted RBP18.12■□□□□ 0.49
LRFN1-201ENST00000248668 RESP18Q5W5W9 173 aa18.12■□□□□ 0.49
LRFN1-201ENST00000248668 SPTLC3Q9NUV7 552 aa18.12■□□□□ 0.49
LRFN1-201ENST00000248668 IFNKQ9P0W0 207 aa18.12■□□□□ 0.49
LRFN1-201ENST00000248668 MYH13Q9UKX3 1938 aa18.12■□□□□ 0.49
LRFN1-201ENST00000248668 NLRP12P59046 1061 aa18.11■□□□□ 0.49
LRFN1-201ENST00000248668 USP5P45974 858 aa18.11■□□□□ 0.49
LRFN1-201ENST00000248668 METTL16Q86W50 562 aaKnown RBP18.11■□□□□ 0.49
LRFN1-201ENST00000248668 HPSEQ9Y251 543 aa18.11■□□□□ 0.49
LRFN1-201ENST00000248668 ECM29Q5VYK3 1845 aa18.11■□□□□ 0.49
LRFN1-201ENST00000248668 POLR2DO15514 142 aaKnown RBP18.11■□□□□ 0.49
LRFN1-201ENST00000248668 CUTAO60888 179 aa18.11■□□□□ 0.49
LRFN1-201ENST00000248668 ATP1A3P13637 1013 aa18.11■□□□□ 0.49
LRFN1-201ENST00000248668 PKN1Q16512 942 aa18.11■□□□□ 0.49
LRFN1-201ENST00000248668 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.11■□□□□ 0.49
LRFN1-201ENST00000248668 BTAF1O14981 1849 aa18.11■□□□□ 0.49
LRFN1-201ENST00000248668 TIAM2Q8IVF5 1701 aa18.11■□□□□ 0.49
LRFN1-201ENST00000248668 WNT7AO00755 349 aa18.1■□□□□ 0.49
LRFN1-201ENST00000248668 TROAPQ12815 778 aa18.1■□□□□ 0.49
LRFN1-201ENST00000248668 ZNF827Q17R98 1081 aa18.1■□□□□ 0.49
LRFN1-201ENST00000248668 FOXP4Q8IVH2 680 aaPredicted RBP18.1■□□□□ 0.49
LRFN1-201ENST00000248668 GJD4Q96KN9 370 aaPredicted RBP18.1■□□□□ 0.49
LRFN1-201ENST00000248668 SAP30BPQ9UHR5 308 aaKnown RBP18.1■□□□□ 0.49
LRFN1-201ENST00000248668 CDK11BP21127 795 aaKnown RBP18.1■□□□□ 0.49
LRFN1-201ENST00000248668 SARM1Q6SZW1 724 aa18.1■□□□□ 0.49
LRFN1-201ENST00000248668 SLC44A5Q8NCS7 719 aa18.1■□□□□ 0.49
LRFN1-201ENST00000248668 XPO4Q9C0E2 1151 aaKnown RBP18.1■□□□□ 0.49
LRFN1-201ENST00000248668 SH3RF3Q8TEJ3 882 aaPredicted RBP18.1■□□□□ 0.49
LRFN1-201ENST00000248668 CCDC94Q9BW85 323 aaPredicted RBP18.1■□□□□ 0.49
LRFN1-201ENST00000248668 PCDHA5Q9Y5H7 936 aa18.1■□□□□ 0.49
LRFN1-201ENST00000248668 LDHBP07195 334 aaKnown RBP18.09■□□□□ 0.49
LRFN1-201ENST00000248668 MRFAP1L1Q96HT8 127 aa18.09■□□□□ 0.49
LRFN1-201ENST00000248668 FOXP1Q9H334 677 aaPredicted RBP18.09■□□□□ 0.49
LRFN1-201ENST00000248668 SEMA3EO15041 775 aa18.09■□□□□ 0.49
LRFN1-201ENST00000248668 KRBA2Q6ZNG9 492 aa18.09■□□□□ 0.49
LRFN1-201ENST00000248668 SEPT12Q8IYM1 358 aa18.09■□□□□ 0.49
LRFN1-201ENST00000248668 RNF26Q9BY78 433 aaPredicted RBP18.09■□□□□ 0.49
LRFN1-201ENST00000248668 SERTAD1Q9UHV2 236 aa18.09■□□□□ 0.49
LRFN1-201ENST00000248668 PRR29P0C7W0 189 aa18.08■□□□□ 0.49
LRFN1-201ENST00000248668 RILPL1Q5EBL4 403 aa18.08■□□□□ 0.49
LRFN1-201ENST00000248668 LRRC8AQ8IWT6 810 aa18.08■□□□□ 0.49
LRFN1-201ENST00000248668 SRBD1Q8N5C6 995 aaKnown RBP18.08■□□□□ 0.49
LRFN1-201ENST00000248668 TGFBRAP1Q8WUH2 860 aa18.08■□□□□ 0.49
LRFN1-201ENST00000248668 RPGRQ92834 1020 aaKnown RBP18.08■□□□□ 0.49
LRFN1-201ENST00000248668 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.08■□□□□ 0.49
LRFN1-201ENST00000248668 FBXO2Q9UK22 296 aaPredicted RBP18.08■□□□□ 0.49
LRFN1-201ENST00000248668 GRAPQ13588 217 aa18.08■□□□□ 0.48
LRFN1-201ENST00000248668 ZNF174Q15697 407 aa18.08■□□□□ 0.48
LRFN1-201ENST00000248668 TMC6Q7Z403 805 aa18.08■□□□□ 0.48
LRFN1-201ENST00000248668 CTCFLQ8NI51 663 aaPredicted RBP18.08■□□□□ 0.48
LRFN1-201ENST00000248668 GRAPLQ8TC17 118 aaPredicted RBP18.08■□□□□ 0.48
LRFN1-201ENST00000248668 TRMT1Q9NXH9 659 aaKnown RBP18.08■□□□□ 0.48
LRFN1-201ENST00000248668 ADAMTS3O15072 1205 aa18.08■□□□□ 0.48
LRFN1-201ENST00000248668 FUT2Q10981 343 aa18.08■□□□□ 0.48
LRFN1-201ENST00000248668 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.48
LRFN1-201ENST00000248668 CSRNP2Q9H175 543 aa18.08■□□□□ 0.48
LRFN1-201ENST00000248668 AFF2P51816 1311 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 TFAP4Q01664 338 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 MAPKAPK5Q8IW41 473 aa18.07■□□□□ 0.48
LRFN1-201ENST00000248668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms