RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 PPP1R12BO60237 982 aaPredicted RBP10.44□□□□□ -0.74
COL21A1-201ENST00000244728 CALM1P0DP23 149 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 CALM2P0DP24 149 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 CALM3P0DP25 149 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 KRT2P35908 639 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 AMPD3Q01432 767 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 IQCB1Q15051 598 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 PIGBQ92521 554 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 VPS54Q9P1Q0 977 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 A2ML1A8K2U0 1454 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 EBAG9O00559 213 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 AKR1B10O60218 316 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 PTPN12Q05209 780 aaKnown RBP10.44□□□□□ -0.74
COL21A1-201ENST00000244728 BRD3Q15059 726 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 USPL1Q5W0Q7 1092 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 GIGYF2Q6Y7W6 1299 aaKnown RBP10.44□□□□□ -0.74
COL21A1-201ENST00000244728 TGFBRAP1Q8WUH2 860 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 RABEP2Q9H5N1 569 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 PDE11AQ9HCR9 933 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 ADGRB1O14514 1584 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 IGKV5-2P06315 115 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 TUBBP07437 444 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 UBXN1Q04323 297 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 TNIP1Q15025 636 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 EHBP1Q8NDI1 1231 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 GDAP1L1Q96MZ0 367 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 EPC1Q9H2F5 836 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 ZCCHC17Q9NP64 241 aaKnown RBP10.43□□□□□ -0.74
COL21A1-201ENST00000244728 SHPRHQ149N8 1683 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 NRXN1Q9ULB1 1477 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 PCCAP05165 728 aaPredicted RBP10.43□□□□□ -0.74
COL21A1-201ENST00000244728 CYLC1P35663 651 aaPredicted RBP10.43□□□□□ -0.74
COL21A1-201ENST00000244728 CRKLP46109 303 aaKnown RBP10.43□□□□□ -0.74
COL21A1-201ENST00000244728 GYS2P54840 703 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 LONRF2Q1L5Z9 754 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 AFAP1L1Q8TED9 768 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 RABGGTAQ92696 567 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 TAF4BQ92750 862 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 TMEM87BQ96K49 555 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 CARD10Q9BWT7 1032 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 SERTAD1Q9UHV2 236 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 HECW2Q9P2P5 1572 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 PDE8BO95263 885 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 CCZ1BP86790 482 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 CCZ1P86791 482 aaPredicted RBP10.43□□□□□ -0.74
COL21A1-201ENST00000244728 TFAP4Q01664 338 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 CCDC122Q5T0U0 273 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 GJB4Q9NTQ9 266 aa10.43□□□□□ -0.74
COL21A1-201ENST00000244728 NPHP4O75161 1426 aaPredicted RBP10.43□□□□□ -0.74
COL21A1-201ENST00000244728 NOP2P46087 812 aaKnown RBP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 CRB1P82279 1406 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 SP4Q02446 784 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 RILPL1Q5EBL4 403 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 DTHD1Q6ZMT9 781 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 FCHSD1Q86WN1 690 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 DHX40Q8IX18 779 aaKnown RBP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 SYCP3Q8IZU3 236 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 GIMAP7Q8NHV1 300 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 SLF1Q9BQI6 1058 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 CDCA7Q9BWT1 371 aaPredicted RBP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 PARD6BQ9BYG5 372 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 C6orf50Q9HD87 102 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 GPHNQ9NQX3 736 aaPredicted RBP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 PKD2L1Q9P0L9 805 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 TTF2Q9UNY4 1162 aaKnown RBP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 SYNRGQ9UMZ2 1314 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 MACROD2A1Z1Q3 448 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 KRT86O43790 486 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 CALML3P27482 149 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 AKNAD1Q5T1N1 836 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 RRP36Q96EU6 259 aaKnown RBP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 OSBPL5Q9H0X9 879 aaPredicted RBP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 POLR3EQ9NVU0 708 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 GGA1Q9UJY5 639 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 TAF6LQ9Y6J9 622 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 MAP3K15Q6ZN16 1313 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 WDR17Q8IZU2 1322 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 IKBKBO14920 756 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 STX10O60499 249 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 GTF2IP78347 998 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 HLTFQ14527 1009 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 CTNND2Q9UQB3 1225 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 LUC7L2Q9Y383 392 aaKnown RBP10.42□□□□□ -0.74
COL21A1-201ENST00000244728 SALL3Q9BXA9 1300 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 ARAP3Q8WWN8 1544 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 SLFN14P0C7P3 912 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 KRT9P35527 623 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 CHRNDQ07001 517 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 BRINP3Q76B58 766 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 IFNL3Q8IZI9 196 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 FAM76AQ8TAV0 307 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 ALS2CR12Q96Q35 445 aa10.42□□□□□ -0.74
COL21A1-201ENST00000244728 PTPRMP28827 1452 aa10.41□□□□□ -0.74
COL21A1-201ENST00000244728 PSMA7O14818 248 aa10.41□□□□□ -0.74
COL21A1-201ENST00000244728 SLC39A14Q15043 492 aa10.41□□□□□ -0.74
COL21A1-201ENST00000244728 TAX1BP1Q86VP1 789 aa10.41□□□□□ -0.74
COL21A1-201ENST00000244728 SMARCC2Q8TAQ2 1214 aa10.41□□□□□ -0.74
COL21A1-201ENST00000244728 GOLGA5Q8TBA6 731 aa10.41□□□□□ -0.74
COL21A1-201ENST00000244728 SCLT1Q96NL6 688 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms