RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 RANBP6O60518 1105 aaKnown RBP12.04□□□□□ -0.48
HMGCL-201ENST00000235958 PCP11498 1178 aaKnown RBP12.04□□□□□ -0.48
HMGCL-201ENST00000235958 ZKSCAN1P17029 563 aaPredicted RBP12.04□□□□□ -0.48
HMGCL-201ENST00000235958 TFAP4Q01664 338 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 ABCB5Q2M3G0 1257 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 SHROOM1Q2M3G4 852 aaPredicted RBP12.04□□□□□ -0.48
HMGCL-201ENST00000235958 FAM47AQ5JRC9 791 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 STOX1Q6ZVD7 989 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 ANKRD13AQ8IZ07 590 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 NKX2-3Q8TAU0 364 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 SLC10A4Q96EP9 437 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 CLMNQ96JQ2 1002 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
HMGCL-201ENST00000235958 ZSWIM5Q9P217 1185 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 SNX14Q9Y5W7 946 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 UNCXA6NJT0 531 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 B4E1Z4 1266 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 MPHOSPH10O00566 681 aaKnown RBP12.03□□□□□ -0.48
HMGCL-201ENST00000235958 GDF11O95390 407 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 GH2P01242 217 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 AKR1B1P15121 316 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 MCCP23508 829 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 APLP1P51693 650 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 HUNKP57058 714 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 TRDNQ13061 729 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 SAPCD2Q86UD0 394 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
HMGCL-201ENST00000235958 KRT23Q9C075 422 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 CNNM2Q9H8M5 875 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 CABP5Q9NP86 173 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 CSADQ9Y600 493 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 MYH8P13535 1937 aa12.03□□□□□ -0.48
HMGCL-201ENST00000235958 KDM4AO75164 1064 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 ASNSP08243 561 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 VGLL4Q14135 290 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 KRT32Q14532 448 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 ADCK5Q3MIX3 580 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 SCYL3Q8IZE3 742 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 NEDD1Q8NHV4 660 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 NCOA7Q8NI08 942 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 ESR2Q92731 530 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 C22orf23Q9BZE7 217 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 UPF2Q9HAU5 1272 aaKnown RBP12.02□□□□□ -0.49
HMGCL-201ENST00000235958 PICK1Q9NRD5 415 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 GINM1Q9NU53 330 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 NEDD4P46934 1319 aa12.02□□□□□ -0.49
HMGCL-201ENST00000235958 TSPY2A6NKD2 308 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 TSPY3P0CV98 308 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 TSPY8P0CW00 308 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 PTPRAP18433 802 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 GUCY1A2P33402 732 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 COL9A3Q14050 684 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-201ENST00000235958 SEPT2Q15019 361 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 RAB3GAP1Q15042 981 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 NOL9Q5SY16 702 aaKnown RBP12.01□□□□□ -0.49
HMGCL-201ENST00000235958 TMEM179Q6ZVK1 233 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 CYB5R4Q7L1T6 521 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 CHST3Q7LGC8 479 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 SIAH1Q8IUQ4 282 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 NEK1Q96PY6 1258 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 IL17RBQ9NRM6 502 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-201ENST00000235958 ZBTB21Q9ULJ3 1066 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 ABT1Q9ULW3 272 aaKnown RBP12.01□□□□□ -0.49
HMGCL-201ENST00000235958 SNCAIPQ9Y6H5 919 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 ZHX2Q9Y6X8 837 aa12.01□□□□□ -0.49
HMGCL-201ENST00000235958 LAMB1P07942 1786 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 LAMA4Q16363 1823 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 USP17L5A8MUK1 530 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 NMT2O60551 498 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 ANAPC15P60006 121 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 RALYLQ86SE5 291 aaKnown RBP12□□□□□ -0.49
HMGCL-201ENST00000235958 CCDC84Q86UT8 332 aaPredicted RBP12□□□□□ -0.49
HMGCL-201ENST00000235958 ERO1BQ86YB8 467 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 JAKMIP1Q96N16 626 aaKnown RBP12□□□□□ -0.49
HMGCL-201ENST00000235958 ZKSCAN3Q9BRR0 538 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 KANSL2Q9H9L4 492 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 CREBZFQ9NS37 354 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 MTMR4Q9NYA4 1195 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 PAPPA2Q9BXP8 1791 aa12□□□□□ -0.49
HMGCL-201ENST00000235958 IGKV6D-41A0A0C4DH26 115 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 HMGB1P09429 215 aaKnown RBP11.99□□□□□ -0.49
HMGCL-201ENST00000235958 CPA1P15085 419 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 PSMA5P28066 241 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 MCM5P33992 734 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 RBM25P49756 843 aaKnown RBP11.99□□□□□ -0.49
HMGCL-201ENST00000235958 NT5C2P49902 561 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 ZNF157P51786 506 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-201ENST00000235958 EXOSC10Q01780 885 aaKnown RBP11.99□□□□□ -0.49
HMGCL-201ENST00000235958 RGMBQ6NW40 437 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 DHX32Q7L7V1 743 aaKnown RBP11.99□□□□□ -0.49
HMGCL-201ENST00000235958 MB21D2Q8IYB1 491 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-201ENST00000235958 CEP95Q96GE4 821 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 TM6SF1Q9BZW5 370 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 TCP11L1Q9NUJ3 509 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 CLIP2Q9UDT6 1046 aa11.99□□□□□ -0.49
HMGCL-201ENST00000235958 AFG3L2Q9Y4W6 797 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms