RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 SUPT20HL1Q3ZLR7 823 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 TNNI3KQ59H18 835 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 NKIRAS1Q9NYS0 192 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 FPGT-TNNI3KV9GXZ4 949 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 IBTKQ9P2D0 1353 aaPredicted RBP11.74□□□□□ -0.53
TRPS1-201ENST00000220888 DISP3Q9P2K9 1392 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 CCDC160A6NGH7 325 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 GCNT3O95395 438 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 VAV2P52735 878 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 CALCRLQ16602 461 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 TAOK1Q7L7X3 1001 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 RPUSD2Q8IZ73 545 aaKnown RBP11.74□□□□□ -0.53
TRPS1-201ENST00000220888 ST7Q9NRC1 585 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 TYW5A2RUC4 315 aaKnown RBP11.74□□□□□ -0.53
TRPS1-201ENST00000220888 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
TRPS1-201ENST00000220888 CASC4Q6P4E1 433 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 MRPL44Q9H9J2 332 aaKnown RBP11.74□□□□□ -0.53
TRPS1-201ENST00000220888 PTPN23Q9H3S7 1636 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 GPAA1O43292 621 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 FLOT1O75955 427 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 SETDB1Q15047 1291 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 TPH2Q8IWU9 490 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 ZNF594Q96JF6 807 aaPredicted RBP11.73□□□□□ -0.53
TRPS1-201ENST00000220888 GOLGA6CA6NDK9 693 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 GOLGA6BA6NDN3 693 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 TNNC2P02585 160 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 GOLGA6DP0CG33 693 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 BCRP11274 1271 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 TFAP4Q01664 338 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 ZNF569Q5MCW4 686 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 C4orf50Q6ZRC1 276 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 FAM196AQ6ZSG2 479 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 CDC37L1Q7L3B6 337 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 SEC62Q99442 399 aaKnown RBP11.73□□□□□ -0.53
TRPS1-201ENST00000220888 CCDC94Q9BW85 323 aaPredicted RBP11.73□□□□□ -0.53
TRPS1-201ENST00000220888 ZNF277Q9NRM2 450 aaPredicted RBP11.73□□□□□ -0.53
TRPS1-201ENST00000220888 GOLGA6AQ9NYA3 693 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 TTLL7Q6ZT98 887 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 CTNND2Q9UQB3 1225 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 NUB1Q9Y5A7 615 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 ATP5DP30049 168 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 KIAA1841Q6NSI8 718 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 RUFY3Q7L099 469 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 SESTD1Q86VW0 696 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 SUGCTQ9HAC7 445 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 ABCC1P33527 1531 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 MYCP01106 439 aaPredicted RBP11.73□□□□□ -0.53
TRPS1-201ENST00000220888 PPP2R5BQ15173 497 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 FAM102BQ5T8I3 360 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 NRBP2Q9NSY0 501 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 CTTNBP2NLQ9P2B4 639 aa11.73□□□□□ -0.53
TRPS1-201ENST00000220888 ANGEL1Q9UNK9 670 aaKnown RBP11.73□□□□□ -0.53
TRPS1-201ENST00000220888 ELP1O95163 1332 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 MCTP2Q6DN12 878 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 EPSTI1Q96J88 318 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 MMS19Q96T76 1030 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 ARFGAP3Q9NP61 516 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 ARPP21Q9UBL0 812 aaPredicted RBP11.72□□□□□ -0.53
TRPS1-201ENST00000220888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRPS1-201ENST00000220888 H0YCG3 227 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 PFDN6O15212 129 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 WDR46O15213 610 aaKnown RBP11.72□□□□□ -0.53
TRPS1-201ENST00000220888 POLR2MP0CAP2 368 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 GTF2F1P35269 517 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRPS1-201ENST00000220888 IGBP1P78318 339 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 REXO1Q8N1G1 1221 aaKnown RBP11.72□□□□□ -0.53
TRPS1-201ENST00000220888 UIMC1Q96RL1 719 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 DBNDD2Q9BQY9 259 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 HESX1Q9UBX0 185 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 LIG4P49917 911 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 SCNN1DP51172 638 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 MAP7Q14244 749 aa11.72□□□□□ -0.53
TRPS1-201ENST00000220888 CERKLQ49MI3 558 aaPredicted RBP11.72□□□□□ -0.53
TRPS1-201ENST00000220888 XPOTO43592 962 aaKnown RBP11.71□□□□□ -0.53
TRPS1-201ENST00000220888 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
TRPS1-201ENST00000220888 CSPG5O95196 566 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 AK2P54819 239 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 ATL3Q6DD88 541 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 CEP85Q6P2H3 762 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 CSGALNACT2Q8N6G5 542 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 ARFGAP2Q8N6H7 521 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 BABAM1Q9NWV8 329 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 SORBS3O60504 671 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 ITKQ08881 620 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 LGSNQ5TDP6 509 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 ZBTB33Q86T24 672 aa11.71□□□□□ -0.53
TRPS1-201ENST00000220888 MRRFQ96E11 262 aaKnown RBP11.71□□□□□ -0.53
TRPS1-201ENST00000220888 ERVV-2B6SEH9 535 aa11.71□□□□□ -0.54
TRPS1-201ENST00000220888 TUBB4AP04350 444 aa11.71□□□□□ -0.54
TRPS1-201ENST00000220888 HOXB7P09629 217 aa11.71□□□□□ -0.54
TRPS1-201ENST00000220888 RNASELQ05823 741 aaKnown RBP11.71□□□□□ -0.54
TRPS1-201ENST00000220888 CCDC122Q5T0U0 273 aa11.71□□□□□ -0.54
TRPS1-201ENST00000220888 TRIM37O94972 964 aa11.71□□□□□ -0.54
TRPS1-201ENST00000220888 IVLP07476 585 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms