RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 FAM182BQ5T319 152 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 GRAMD1CQ8IYS0 662 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 EXOC1Q9NV70 894 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 OVOS2A0A0G2JMS6 1433 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 FER1L4A9Z1Z3 1794 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 PPP6R2O75170 966 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 CASP7P55210 303 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 CCDC144BQ3MJ40 725 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 LONRF3Q496Y0 759 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 MAPKAPK5Q8IW41 473 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 CTNND2Q9UQB3 1225 aa14.01□□□□□ -0.17
TM9SF4-201ENST00000217315 CSF1RP07333 972 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 ST5P78524 1137 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 AMPD3Q01432 767 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 TEX11Q8IYF3 940 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 ERO1AQ96HE7 468 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 CTDP1Q9Y5B0 961 aaPredicted RBP14□□□□□ -0.17
TM9SF4-201ENST00000217315 KIF28PB7ZC32 967 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 AKR1B15C9JRZ8 316 aaPredicted RBP14□□□□□ -0.17
TM9SF4-201ENST00000217315 RIMBP2O15034 1052 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 FDPSP14324 419 aaKnown RBP14□□□□□ -0.17
TM9SF4-201ENST00000217315 GOLGA8FQ08AF8 430 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 GOLGA8DPQ0D2H9 430 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 SPA17Q15506 151 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 JAKMIP3Q5VZ66 844 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 PKNOX2Q96KN3 472 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14□□□□□ -0.171e-6■□□□□ 9.9
TM9SF4-201ENST00000217315 UFL1O94874 794 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 KLHL34Q8N239 644 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 TGFBRAP1Q8WUH2 860 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 SYNRGQ9UMZ2 1314 aa14□□□□□ -0.17
TM9SF4-201ENST00000217315 MMP1P03956 469 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 UBXN1Q04323 297 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 BMS1Q14692 1282 aaKnown RBP13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 CCDC181Q5TID7 509 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 CACNA2D4Q7Z3S7 1137 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 KRT222Q8N1A0 295 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 RUFY1Q96T51 708 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 CSRNP2Q9H175 543 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 PCDHB6Q9Y5E3 794 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 ZNF76P36508 570 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 SKIDA1Q1XH10 827 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 CCDC102AQ96A19 550 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 AKAP12Q02952 1782 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 EIF6P56537 245 aaKnown RBP13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 ANTXR2P58335 489 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 FERMT2Q96AC1 680 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 C6orf50Q9HD87 102 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 ARHGAP6O43182 974 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 SPECC1LQ69YQ0 1117 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 WDR66Q8TBY9 1149 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 KCNF1Q9H3M0 494 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 LY9Q9HBG7 655 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 PIK3C2AO00443 1686 aa13.99□□□□□ -0.17
TM9SF4-201ENST00000217315 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 CDC25BP30305 580 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 DNA2P51530 1060 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 PTGDRQ13258 359 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 PLA2G4DQ86XP0 818 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 CARD6Q9BX69 1037 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 PLA2G12BQ9BX93 195 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 FOXP1Q9H334 677 aaPredicted RBP13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 GSG1L2A8MUP6 293 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 TUBB4AP04350 444 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 RRP36Q96EU6 259 aaKnown RBP13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 RNF26Q9BY78 433 aaPredicted RBP13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 SENP2Q9HC62 589 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 TNNI2P48788 182 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 TDRD12Q587J7 1177 aaKnown RBP13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 ZNF569Q5MCW4 686 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 TIGD1Q96MW7 591 aa13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 ZC3H12CQ9C0D7 883 aaKnown RBP13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 PUF60Q9UHX1 559 aaKnown RBP13.98□□□□□ -0.17
TM9SF4-201ENST00000217315 SOS2Q07890 1332 aaPredicted RBP13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 CCDC66A2RUB6 948 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 WWC2Q6AWC2 1192 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 CEP89Q96ST8 783 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 UBA5Q9GZZ9 404 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 GNA11P29992 359 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 FAM193AP78312 1265 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 SMIM5Q71RC9 77 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 PNMA1Q8ND90 353 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 DESI2Q9BSY9 194 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 COBLO75128 1261 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 WDHD1O75717 1129 aaPredicted RBP13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 EIF3JO75822 258 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 PARP1P09874 1014 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 ARID4AP29374 1257 aaPredicted RBP13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 FUCA2Q9BTY2 467 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 SRRTQ9BXP5 876 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 TAB2Q9NYJ8 693 aa13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 SRP68Q9UHB9 627 aaKnown RBP13.97□□□□□ -0.17
TM9SF4-201ENST00000217315 SCG2P13521 617 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 SARM1Q6SZW1 724 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms