RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 USP5P45974 858 aa9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 AKAP17AQ02040 695 aaKnown RBP9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 SHC4Q6S5L8 630 aa9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 JMYQ8N9B5 988 aa9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 OXER1Q8TDS5 423 aa9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 SH3RF3Q8TEJ3 882 aaPredicted RBP9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 SHISA4Q96DD7 197 aa9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 RNF26Q9BY78 433 aaPredicted RBP9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 ANO10Q9NW15 660 aa9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 VPS54Q9P1Q0 977 aa9.21□□□□□ -0.93
HMGXB4-201ENST00000216106 TSPY2A6NKD2 308 aa9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 GOLGA6L19H0YKK7 550 aa9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 ORC4O43929 436 aa9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 SLC3A2P08195 630 aaKnown RBP9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 TOB1P50616 345 aaPredicted RBP9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 NAV1Q8NEY1 1877 aa9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 SYKP43405 635 aa9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 PDE4BQ07343 736 aa9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 RBM17Q96I25 401 aaKnown RBP9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 KIAA1468Q9P260 1216 aa9.21□□□□□ -0.94
HMGXB4-201ENST00000216106 BIN1O00499 593 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 OFD1O75665 1012 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 FUT2Q10981 343 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 PKN1Q16512 942 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 SBK1Q52WX2 424 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 FOXP1Q9H334 677 aaPredicted RBP9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 GGA1Q9UJY5 639 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 BECN2A8MW95 431 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 POLRMTO00411 1230 aaKnown RBP9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 ATP2B1P20020 1258 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 PPP2R5BQ15173 497 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 DPCR1Q3MIW9 517 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 SPECC1Q5M775 1068 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 PLA2G4DQ86XP0 818 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 DHX40Q8IX18 779 aaKnown RBP9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 CEP57L1Q8IYX8 460 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 DYNLL2Q96FJ2 89 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 CD209Q9NNX6 404 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 V9GY48 417 aaPredicted RBP9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 CDK5RAP2Q96SN8 1893 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 DDAH1O94760 285 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 ZNF75DP51815 510 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 ZRSR1Q15695 479 aaKnown RBP9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 DRC7Q8IY82 874 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 C17orf53Q8N3J3 647 aaPredicted RBP9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 TGFBRAP1Q8WUH2 860 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 KCNF1Q9H3M0 494 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 RBM28Q9NW13 759 aaKnown RBP9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 MKRN1Q9UHC7 482 aaKnown RBP9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 PCDHB6Q9Y5E3 794 aa9.2□□□□□ -0.94
HMGXB4-201ENST00000216106 TXNRD1Q16881 649 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 RESP18Q5W5W9 173 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 PROM2Q8N271 834 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 AOPEPQ8N6M6 819 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 HPSEQ9Y251 543 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 FAM205CA6NFA0 338 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 CALM1P0DP23 149 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 CALM2P0DP24 149 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 CALM3P0DP25 149 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 GSTO1P78417 241 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 GRIN1Q05586 938 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 RILPL1Q5EBL4 403 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 C12orf60Q5U649 245 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 TMED8Q6PL24 325 aaPredicted RBP9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 TMTC3Q6ZXV5 915 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 CTCFLQ8NI51 663 aaPredicted RBP9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 PIBF1Q8WXW3 757 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 CABP5Q9NP86 173 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 POLLQ9UGP5 575 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 CNTNAP5Q8WYK1 1306 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 ZBTB22O15209 634 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 PRPF3O43395 683 aaKnown RBP9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 CUTAO60888 179 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 BAG3O95817 575 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 XBP1P17861 261 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 PTGS1P23219 599 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 ATP2B4P23634 1241 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 ISM2Q6H9L7 571 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 C15orf52Q6ZUT6 534 aaKnown RBP9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 MAPKAPK5Q8IW41 473 aa9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 SRBD1Q8N5C6 995 aaKnown RBP9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 KRI1Q8N9T8 703 aaKnown RBP9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 NOL10Q9BSC4 688 aaKnown RBP9.19□□□□□ -0.94
HMGXB4-201ENST00000216106 TFAP4Q01664 338 aa9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 RCSD1Q6JBY9 416 aa9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 SLC44A5Q8NCS7 719 aa9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 RTFDC1Q9BY42 306 aaPredicted RBP9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 SAP30BPQ9UHR5 308 aaKnown RBP9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 NRBP1Q9UHY1 535 aa9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 ANKRD31Q8N7Z5 1873 aa9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 C6orf229H3BNL8 230 aa9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 EARS2Q5JPH6 523 aaKnown RBP9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 TBC1D16Q8TBP0 767 aa9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 PHF20Q9BVI0 1012 aa9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 NAT10Q9H0A0 1025 aaKnown RBP9.18□□□□□ -0.94
HMGXB4-201ENST00000216106 BBOX1O75936 387 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms