RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 CCDC42Q96M95 316 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 PPIP5K2O43314 1243 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 ZFYP08048 801 aaPredicted RBP13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 PDE6BP35913 854 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 IQCA1Q86XH1 822 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 SCLT1Q96NL6 688 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 CCDC194A0A1B0GVG4 234 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 RNF113AO15541 343 aaKnown RBP13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 WTAPQ15007 396 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 CCDC121Q6ZUS5 278 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 SLF1Q9BQI6 1058 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 MAP3K15Q6ZN16 1313 aa13.01□□□□□ -0.33
DNMT3B-201ENST00000201963 EZRP15311 586 aaKnown RBP13□□□□□ -0.33
DNMT3B-201ENST00000201963 KRT9P35527 623 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 LIG3P49916 1009 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 SLC9C2Q5TAH2 1124 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 SYNE4Q8N205 404 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 LINC00116Q8NCU8 138 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 TTF2Q9UNY4 1162 aaKnown RBP13□□□□□ -0.33
DNMT3B-201ENST00000201963 ACTN2P35609 894 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 VAV2P52735 878 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 IRX5P78411 483 aaPredicted RBP13□□□□□ -0.33
DNMT3B-201ENST00000201963 RABGGTAQ92696 567 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 MAP4K1Q92918 833 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 SUCLG2Q96I99 432 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 MAPK8IP1Q9UQF2 711 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 CHRNA5P30532 468 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 ZNF827Q17R98 1081 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 ERFEQ4G0M1 354 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 CFAP58Q5T655 872 aa13□□□□□ -0.33
DNMT3B-201ENST00000201963 A0A0G2JLW4 131 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 C21orf2O43822 256 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 MLKLQ8NB16 471 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 MYO1CO00159 1063 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 CATIPQ7Z7H3 387 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 ANKRD7Q92527 254 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 RNF41Q9H4P4 317 aaPredicted RBP12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 GOLGA6BA6NDN3 693 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 CYP19A1P11511 503 aaPredicted RBP12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 PRPF4BQ13523 1007 aaKnown RBP12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 GIGYF2Q6Y7W6 1299 aaKnown RBP12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 PHKBQ93100 1093 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 PDE8AO60658 829 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 IL15P40933 162 aaPredicted RBP12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 PRKG1Q13976 671 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 MMRN2Q9H8L6 949 aa12.99□□□□□ -0.33
DNMT3B-201ENST00000201963 PSMA7O14818 248 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 RPS8P62241 208 aaKnown RBP12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 RAD51AP2Q09MP3 1159 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 SND1Q7KZF4 910 aaKnown RBP eCLIP12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 HINFPQ9BQA5 517 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 PARD6BQ9BYG5 372 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 FAN1Q9Y2M0 1017 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 MAP2K2P36507 400 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 SCRN1Q12765 414 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 GCKRQ14397 625 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 E2F4Q16254 413 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 TBC1D9BQ66K14 1250 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 PSMB7Q99436 277 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 RMND1Q9NWS8 449 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 STAT6P42226 847 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 KRT40Q6A162 431 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 KBTBD3Q8NAB2 608 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 STAMQ92783 540 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 EPC1Q9H2F5 836 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 CABP5Q9NP86 173 aa12.98□□□□□ -0.33
DNMT3B-201ENST00000201963 GOLGA6L10A0A0M3HER8 536 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 HOXB7P09629 217 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 HPDP32754 393 aaPredicted RBP12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 TUBB2AQ13885 445 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 TUBB2BQ9BVA1 445 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 PLEKHA4Q9H4M7 779 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 TCP11L1Q9NUJ3 509 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 RCOR1Q9UKL0 485 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 CLIC4Q9Y696 253 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 COL5A2P05997 1499 aaPredicted RBP12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 ATP8B1O43520 1251 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 CUTAO60888 179 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 USP5P45974 858 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 NFIXQ14938 502 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 POSTNQ15063 836 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 CCDC40Q4G0X9 1142 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 B4GALNT4Q76KP1 1039 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 PLA2G4DQ86XP0 818 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 PGBD1Q96JS3 809 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
DNMT3B-201ENST00000201963 E7EWF7 191 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 NAA25Q14CX7 972 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 CPLX4Q7Z7G2 160 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 TMTC1Q8IUR5 882 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 DIS3L2Q8IYB7 885 aaKnown RBP12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 BCAS4Q8TDM0 211 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms