RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Taf1dQ9D4V4 322 aa16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Sh3bgrQ9WUZ7 214 aa16.52■□□□□ 0.24
Ssr1-204ENSMUST00000225319 Cfap99A0A140LIX9 648 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Ces1aE9PYP1 563 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Eddm13E9Q7F5 164 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Vmn2r68L7N2B3 851 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 TbcaP48428 108 aaKnown RBP16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Traf3ip1Q149C2 625 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Tbc1d2bQ3U0J8 965 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Tmem109Q3UBX0 243 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Usp28Q5I043 1051 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 DlatQ8BMF4 642 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Cdk8Q8R3L8 464 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 SdsQ8VBT2 327 aa16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Eif4enif1Q9EST3 983 aaKnown RBP16.52■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Bcorl1A2AQH4 1781 aa16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Lnx1O70263 728 aa16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Pdia4P08003 638 aaKnown RBP16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Kif3aP28741 701 aa16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Ppfia3P60469 1194 aa16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Scg2Q03517 617 aa16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 VrtnQ3SYK4 740 aa16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Wasf1Q8R5H6 559 aa16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Znf287Q9EQB9 759 aa16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Zmym2Q9CU65 1376 aa16.51■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Ccdc112A0AUP1 442 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Ccng2O08918 344 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Hmx1O70218 332 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Nmt2O70311 529 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Klhdc9Q3USL1 350 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Dpf2Q61103 391 aaKnown RBP16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Ifit1Q64282 463 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Tekt3Q6X6Z7 490 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Glis3Q6XP49 780 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Tbc1d5Q80XQ2 815 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Ubxn4Q8VCH8 506 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Ly6iQ9WU67 134 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 TicrrQ8BQ33 1889 aa16.5■□□□□ 0.23
Ssr1-204ENSMUST00000225319 A0A1W2P6Q8 802 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Gm9048A0A1W2P7H4 802 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 A0A1W2P7Z8 802 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Gm9046A0A1W2P855 802 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Brpf3B2KF05 1204 aaKnown RBP16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Ces1hD3Z298 562 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Vcam1P29533 739 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Ptpn12P35831 775 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Eef2P58252 858 aaKnown RBP16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Nucb2P81117 420 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Spata18Q0P557 537 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Map3k9Q3U1V8 1077 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 OplahQ8K010 1288 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Nup133Q8R0G9 1155 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Styxl1Q9DAR2 321 aa16.49■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Il7P10168 154 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Psmd1Q3TXS7 953 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Map3k12Q60700 888 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Scnn1aQ61180 699 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Tor1aip2Q8BYU6 502 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Stk39Q9Z1W9 556 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Tbc1d8bA3KGB4 1114 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Wdr78E9PYY5 807 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Clec11aO88200 328 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 FosbP13346 338 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Rrp1P56183 494 aaKnown RBP16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Eya3P97480 510 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Tigd5Q499M4 642 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Srek1Q8BZX4 494 aaKnown RBP16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Yipf1Q91VU1 306 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Clip2Q9Z0H8 1047 aa16.48■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Zscan18E9PUD6 809 aa16.47■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Klrk1O54709 232 aa16.47■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Cypt1Q8CH20 168 aa16.47■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Gimap7Q8R379 293 aa16.47■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Prpf3Q922U1 683 aaKnown RBP16.47■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Cep89Q9CZX2 791 aa16.47■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Mad2l2Q9D752 211 aa16.47■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Col1a1P11087 1453 aa16.47■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Golgb1E9PVZ8 3238 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Gm973E9Q295 1059 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Usp53P15975 1069 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 U2af2P26369 475 aaKnown RBP16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Large2Q5XPT3 690 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Gm2163Q6PCY5 473 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Tmc4Q7TQ65 694 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Gpatch3Q8BIY1 525 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Gpr150Q8BL07 427 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Evc2Q8K1G2 1220 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 RabggtaQ9JHK4 567 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Myh8P13542 1937 aa16.46■□□□□ 0.23
Ssr1-204ENSMUST00000225319 Rc3h1Q4VGL6 1130 aaKnown RBP16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Polr3gQ6NXY9 223 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Kcnf1Q7TSH7 493 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Camkk2Q8C078 588 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Lrrc2Q8VDB8 371 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Sept14Q9DA97 430 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Klrc1Q9Z202 244 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Cacna1fQ9JIS7 1985 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gm45140A0A0N4SUM8 220 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Stx1aO35526 288 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Psmd14O35593 310 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 212.1 ms