RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Rbm42Q91V81 474 aaKnown RBP10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Gtpbp4Q99ME9 634 aaKnown RBP10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Pdcd6ipQ9WU78 869 aaKnown RBP10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Msh6P54276 1358 aaKnown RBP10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Slc27a3O88561 667 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 GabrdP22933 449 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 PcQ05920 1178 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Hdhd2Q3UGR5 259 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Atg9aQ68FE2 551 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 GlmnQ8BZM1 596 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 NapaQ9DB05 295 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Snapc4Q8BP86 1333 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Ube3aO08759 870 aa10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Arid5bQ8BM75 1188 aaKnown RBP10.61□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Lrrc36Q3V0M2 755 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Nxf2Q4ZGD8 691 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Ctr9Q62018 1173 aaKnown RBP10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Fermt2Q8CIB5 680 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Adarb2Q9JI20 745 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Epb41l3Q9WV92 929 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Znf541Q0GGX2 1363 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Rreb1Q3UH06 1700 aaKnown RBP10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Prdm11A2AGX3 565 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Card6E9PWH2 1175 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Rsph10bE9PYQ0 876 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Mybl2P48972 704 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Spata18Q0P557 537 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Madcam1Q61826 405 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Smco2Q9DA21 347 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 LdhaP06151 332 aaKnown RBP10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Krt39Q6IFX4 482 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Csrnp2Q8BGQ2 534 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 QarsQ8BML9 775 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 AbraQ8BUZ1 375 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Erlin1Q91X78 346 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Pdia6Q922R8 440 aaKnown RBP10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Cxcl11Q9JHH5 100 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Abca8aQ8K442 1620 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Ino80Q6ZPV2 1559 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Pim2Q62070 370 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Rbm15bQ6PHZ5 887 aaKnown RBP10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Map3k11Q80XI6 850 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Ces1dQ8VCT4 565 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Prpf40aQ9R1C7 953 aaKnown RBP10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Atp1a4Q9WV27 1032 aa10.6□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Slc4a1P04919 929 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Il15P48346 162 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Trak2Q6P9N8 913 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Snd1Q78PY7 910 aaKnown RBP10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 VmacQ8BP01 174 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Etf1Q8BWY3 437 aaKnown RBP10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 NelfbQ8C4Y3 580 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Mknk2Q8CDB0 459 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Igfbp6P47880 238 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Tbc1d31Q6NXY1 996 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Tas2r124Q7M718 309 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Cnpy3Q9DAU1 276 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Lonp2Q9DBN5 852 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 ByslO54825 436 aaKnown RBP10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Usp53P15975 1069 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Abcb4P21440 1276 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Eya3P97480 510 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Armc2Q3URY6 854 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Mtss1lQ6P9S0 715 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Ehd2Q8BH64 543 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Srp68Q8BMA6 625 aaKnown RBP10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Calml4Q91WQ9 153 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Mei1Q9D4I2 1268 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Ccnt1Q9QWV9 724 aaKnown RBP10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 GdaQ9R111 454 aa10.59□□□□□ -0.71
Ldlr-202ENSMUST00000213114 Cyp19a1P28649 503 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Bbof1Q3V079 533 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gas8Q60779 478 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ovgp1Q62010 721 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Tcerg1lQ3B807 590 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Haus6Q6NV99 933 aaKnown RBP10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Naa15Q80UM3 865 aaKnown RBP10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Hps6Q8BLY7 805 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ints5Q8CHT3 1018 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Efhd1Q9D4J1 240 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Otud7bB2RUR8 840 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 PsdQ5DTT2 1024 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Krt15Q61414 452 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ccdc148Q6P5U8 527 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Fam177a1Q8BR63 207 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Pcdha12Q91Y18 950 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 HibadhQ99L13 335 aaKnown RBP10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Cabp5Q9JLK3 173 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 DnmbpQ6TXD4 1580 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Mst1rQ62190 1378 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ubn2Q80WC1 1314 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Col20a1Q923P0 1320 aa10.58□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Olfr247E9PVJ7 320 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Olfr819K7N727 320 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Pls1Q3V0K9 630 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Wdr3Q8BHB4 942 aaKnown RBP10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Rps6ka5Q8C050 863 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Apol10aQ8CCA5 318 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Kif17Q99PW8 1038 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ppil4Q9CXG3 492 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms